Professional Documents
Culture Documents
B.Sc. II YEAR
Laboratory Course-II
DEPARTMENT OF BOTANY
SCHOOL OF SCIENCES
UTTARAKHAND OPEN UNIVERSITY
LABORATORY COURSE-II BSCBO-204
BSCBO-204
LABORATORY COURSE-II
SCHOOL OF SCIENCES
DEPARTMENT OF BOTANY
UTTARAKHAND OPEN UNIVERSITY
Expert Committee
Prof. J. C. Ghildiyal Prof. G.S. Rajwar
Retired Principal Principal
Government PG College Government PG College
Karnprayag Augustmuni
Board of Studies
Late Prof. S. C. Tewari Prof. Uma Palni
Department of Botany Department of Botany
HNB Garhwal University, Retired, DSB Campus,
Srinagar Kumoun University, Nainital
Programme Coordinator
Course Editor
Prof. N.S. Bisht
Head, Department of Botany
HNB Garhwal Central University
Pauri Campus, Pauri
CONTENTS
Unit-11-Determine the mean basal cover and total basal cover. 193-197
1.1 OBJECTIVES
After reading this section you will know, how to-
Carry out plant identification
Describe the locality of available plants
Describe the meaning of semi technical language
Describe the families in semi technical language.
1.2 INTRODUCTION
The flowering plants, also known as Angiospermae or Magnoliophyta, are also considered to
be the most diverse group of land plants constituting about 443families. Angiosperms are
distinguished from gymnosperms on the basis of specific characteristics including flowers,
endosperms and the fruit production. An angiospermic plant produces seeds within an
enclosure (a fruit). The term "angiosperm" comes from the Greek word (angeion, "case" or
"casing", and sperma, "seed") meaning "enclosed seeds".
Angiosperms might be differentiated from other seed plants in several ways. The
characteristic feature of angiosperms is the flower. Flowers show remarkable variation in
form and elaboration, and provide the most trustworthy external characteristics for
establishing relationships among angiosperm species. Mostly, the floral apparatus arise
terminally on a shoot or from the axil of a leaf. Occasionally, a flower arises singly in the axil
of an ordinary foliage leaf. Typically, the flower-bearing portion of the plant forms a more or
less elaborate branch system called inflorescence.
Traditionally, the flowering plants are divided into two groups as: Dicotyledoneae or
Magnoliopsida and Monocotyledoneae or Liliopsida.
Among 443 families of flowering plants, 42 families are referred as the most-
diversified on the basis of species. These 42 families are Asteraceae, Fabaceae, Rubiaceae,
Poaceae, Lamiaceae, Euphorbiaceae, Melastomataceae, Myrtaceae, Apocynaceae,
Cyperaceae, Malvaceae, Araceae, Ericaceae, Gesneriaceae, Apiaceae, Brassicaceae,
Piperaceae, Acanthaceae, Rosaceae, Boraginaceae, Utricaceae, Ranunculaceae, Lauraceae,
Solanaceae, Companulaceae, Arecaceae, Annonaceae, Caryophyllaceae, Orobanchaceae,
Amranthaceae, Iridaceae, Aizoaceae, Rutaceae, Phyllanthaceae, Scrophulariaceae,
Gentianaceae, Convolvulaceae, Proteaceae, Sapindaceae, Cactaceae, and Araliaceae.
Plant identification is the process of matching a specimen plant to a known taxon.
With the help of dichotomous keys or multi-access keys the plant identification is made.
Plant identification has been evolved over hundreds of years and depends to a large extent on
what criteria and whose system is used. Plant identification implies comparisons of certain
characteristics and then assigning a particular plant to a known taxonomic group, ultimately
arriving at a species. Taxonomy is the branch of botany which deals with plant
identification, nomenclature and classification. The term, first coined by French botanist
A. P. de Candolle (1813). Carl Linnaeus used the term 'Systematics' which now includes
identification, nomenclature and evolutionary relationships.
Locality of available plants can be described on the basis of place, spot, or district etc. with
reference to plant‘s availability. As we very well know that innumerable plants grow on the
earth. At first we do not know the names of plants growing around us. In fact, most of us
never bother to even look around. But we should have a curiosity to know about the
variations of these plants. For this, first we have to follow the identification of these plants.
1.3.1-Identification
Usually Identification is a basic activity and one of the primary objectives of systematics.
Practically, it involves both classification and nomenclature. Identification is simply the
determination of the similarities or differences between two species, i.e., two species are the
same or they are different. Here first we will try to compare an unknown plant with a named
specimen and then determine that both are the same or showing differences by following
classification. If unknown belongs to the same group (species, genus, family. etc.) as a known
specimen, the information is stored in classification systems which become available and
applicable to the material at hand. Therefore we can say that identification and classification
involve comparison and judgment and require a definition of criteria of similarities .
In terms of reliability or accuracy the best method of identification is expert
determination. Here let us discuss methods of plant identification:
First Method:
In this method we have to follow the determination of the families to which the unknown
plant belongs. By knowing the name of the family we can turn the keys to genera for
determining the generic name and then for the specific identity of the plant to the species key.
Second Method:
In this method we will utilize the latest floras and check list of the particular region. These
comprise usually an index to the plants known for the locality and generally provide pertinent
habit, distribution and frequency of plants.
Third Method:
The identification of plant is done by studying monographs or revisionary works for the
particular family or genus.
Plant Characters before its identification are studied on the following lines:
1. Habit and habitat of plant is studied in natural surroundings only. Then the plant nature is
studied whether is herbaceous, or woody; annual or perennial.
Different parts of the flower are represented by different symbols which form a formula
called floral formula.
Various parts of flower in floral formula are represented as follows:
Br = Bracteate
Ebr = Ebracteate
Brl = Bracteolate
= Actinomorphic
Φ = Zygomorphic
= Male
= Female
= Hermaphrodite
K = Calyx
C = Corolla
P = Perianth
A = Androecium
G = Gynoecium
Here we will also learn about few more representations as if the number of sepals are
5 represented as K5(polysepalous). K(5) represents that 5 sepals are fused and termed as
gamosepalous. C5A(α) indicates that many fused stamens are epipetalous. For representation
of superior ovary a line should be below the gynoecium i.e. G and the inferior ovary is
represented by G Different whrols of floral parts can be described as C5+5 means 10 petals are
arranged in two whrols of 5 each.
Floral Diagram
The floral diagram is the most essential and most important after drawing the other necessary
diagrams (like a part of the plant, structure of the flower, L.S. of the flower, a stamen, carpel,
and T.S. of the ovary) for the given plant. It expresses the number, fusion, symmetry and
other similar characteristics of the floral parts in a flower.
Different floral parts in a flower are always expressed in a circular manner. In the
different concentric circles of a floral diagram, the sepals should be drawn in the outermost
circle. The sepals are followed by petals, stamens and carpels towards inner sides,
respectively. Gamosepalous or polysepalous condition is made by joining the sepals or
making them free. Same is the case with petals. Position of sepals and petals must be drawn
in the respective circles corresponding to their actual position in section. A small circle above
the floral diagram represents the mother axis. In zygomorphic flower the mother axis is
shown as Φ while in actinomorphic flower it is drawn as 0. The bract, if present, is drawn
below the floral diagram while the bracteoles are shown on the sides.
For drawing the floral diagram it is necessary to note whether a sepal or space
between two sepals stands towards mother axis. We must start from this particular sepal and
mark the position of other sepals. Petals must be drawn alternate to sepals. In actinomorphic
flowers all sepals and petals must be of same size. But in case of zygomorphic flowers
unequal sized sepals or petals are drawn. Spur in a sepal or petal must be drawn in the form
of a loop.
In case of epipetalous condition, the stamens must be joined to petals with a line.
Stamens are shown by transverse section of anthers. In obdiplostamonous condition the
stamens of outer whorl must be drawn opposite to petals. Introrse stamens are shown facing
towards gynoecium while extrorse towards petals. Use a cross (x) or asterisk (*) sign in place
of a staminode (sterile stamen), if present. The gynoecium must be drawn in the form of
transverse section of the ovary.
Floral characters:
Inflorescence: Axillary cyme or solitary axillary. The flowers may also remain arranged in
axillary or terminal corymbs.
Flower: A prominent disc present below ovary, ebracteate, complete, hermaphrodite,
pedicellate, actinomorphic, pentamerous, hypogynous, cyclic. White coloured scented
flowers are developed.
Calyx: Consist of 5 sepals, gamosepalous and valvate aestivation is found.
Corolla: Petals 5, polypetalous, sometimes are fused at base. Aestivation is imbricate. Petals
are white in colours.
Androecium: Stamens are indefinite and attached to disc (Polyadelphous). Bases of
filaments are fused. Anthers are two celled, dorsifixed or basifixed, introrse.
Gynoecium: Penta to multicarpellary, syncarpous. The ovary is superior, multilocular one or
more ovules in each locule. Axile placentation is found. Style is single and short with yellow
and capitate stigma. A nectariferous disc is present below the ovary.
Fruit: Hesperidium.
Seed: Non-endospermic
Floral formula:
Ebr, , , K(5), C5, Aα(Polyadelphous),G(5 to α)
Fig.1.4 PrunusPersica L.
Floral characters:
Floral characters:
Inflorescence: Usually of racemose or solitary axillary.
Flower: Zygomorphic, bisexual, complete, pentamerous, bracteate, hypogynous or
perigynous.
Calyx: Consist of 5 sepals, gamosepalous. The valvate aestivation is found.
Corolla: Petals 5, polypetalous, papilionaceous. There is a large upper posterior petal
(largest) called standard or vexillum, two lateral petals called the wings and two anterior or
innermost petals more or less fused to form a boat shaped structure called the keel or carina.
This kind of corolla is called the papilionaceous or butterfly shaped corolla. The descending
imbricate aestivation is found. Petals are beautifully coloured.
Androecium: Stamens 10, usually diadelphous (into two groups i.e. 9+1). Nine fuse to form
a sheath round the pistil while 10th is free.
Leaf: Ramal and cauline, simple, opposite decussate, exstipulate, sessile or subsessile; ovate
to oblong, base auriculate. Leaves are entire, acute; under surface covered with wooly
tomentum contain milky latex and showing unicostate reticulate venation.
Floral characters:
Inflorescence: Axillary umbellate cyme.
Flower: Bracteate, two bracteoles, pedicellate, complete, hermaphrodite, actinomorphic,
pentamerous and hypogynous. Flowers are purplish red to white and having very strong
smell.
Calyx: Consist of 5 sepals, polysepalous and are slightly fused at the base.
Corolla: Petals 5, gamopetalous, campanulate. The valvate but sometimes twisted aestivation
is found. Petals are beautifully coloured with pink or whitish with purplish spots.
Androecium: Stamens 5, sometimes epipetalous and are connected with the stigma which is
thus known as gynostegium. Each stamen is in the form of two pollinia. Stamens form
translators which consist of two pollinia connected with the corpusculum with the help of
their individual retinaculae or caudicles. A fleshy scale like laterally compressed coronary
outgrowth arises from the back of each stamen.
Gynoecium: Bicarpellary, superior.Ovaries are separated at the base and many ovules in
each locule. Marginal placentation is found. Two styles are united apically with the stigma to
form a pentangular disc called stigmatic disc.
Fruit: Follicle
Seed: Many, hairy and endospermic
Floral characters:
Inflorescence: Solitary terminal or solitary axillary.
Flower: Bracteate, pedicellate, complete, hermaphrodite, pentamerous, actinomorphic,
hypogynous, large.
Calyx: Consist of 5 sepals, gamosepalous persistent. The valvate or twisted aestivation is
found.
Corolla: Petals 5, gamopetalous and modified into trumpet shape, white. Aestivation is
twisted.
Androecium: Consist of 5 stamens, epipetalous, polyandrous. Filaments are long and anthers
basifixed.
Gynoecium: Bicarpellary, syncarpous, bilocular. Carpels are obliquely placed. The placenta
is swollen with superior ovary and false septum provides a tetralocular appearance. There are
many ovules in each locule. Axile placentation is found. Dome shaped stigma with long style.
Fruit: Spiny capsule opening by four valves.
Seed: Many, Nacrotic and poisonous
Floral formula:
2. Swollen placenta
3. Dome shaped stigma with long style -------------Solanaceae
g. 1. Spiny capsule opening by four valves
2. Many ovules in each locule
3. Nacrotic and poisonous ---------------------------------Datura stramonium
Floral characters:
Inflorescence: Axillary racemose spike.
Flower: Bracteate (leafy bracts), bracteolate ( the bracteoles are leafy and enclosed the bud),
sub sessile, complete, hermaphrodite, pentamerous, zygomorphic, hypogynous, large and
white.
Calyx: Consist of 5 sepals, polysepalous but are slightly conate at the base, quincunical, pale
green in colour. The aestivation is mostly imbricate.
Corolla: Petals 5, gamopetalous, Petals are conate in bilipped corolla, 2/3 bilabiate personate,
consisting of a posterior curved lip of two petals and an anterior lip of three petals. Anterior
most middle petal of anterior lip is raised and strongly nerved, white in colour.
Androecium: Consist of 2 stamens, epipetalous, polyandrous, dithecous, basifixed and
introrse. External anther lobe is higher than inner.
Gynoecium: Bicarpellary, syncarpous, bilocular. Carpels are medianly placed. There are one
to two ovules in each locule Axile placentation is found. Slightly bifid stigma with simple
long hairy style.
Fruit: Capsule
Seed: Large non endospermic seed with hooks also called jaculators.
Floral formula:
Floral characters:
Inflorescence: Verticillaster.
Flower: Bracteate, ebracteolate, pedicellate, complete, hermaphrodite, zygomorphic,
hypogynous, bilabiate, small, aromatic.
Calyx: Consist of 5 sepals, ¼ bilipped consisting of upper posterior lip of one big lobe and
anterior lip of 4 lobe; gamosepalous and violet green in colour. The aestivation is valvate.
Corolla: Petals 5; arranged in 4/1 form, bilabiate, consisting of upper posterior lip of 4 lobes
and lower anterior lip of 1 lobe; gamopetalous, white or pink coloured. Valvate aestivation is
found.
Androecium: Consist of 4 stamens, epipetalous, polyandrous and didynamous. The posterior
stamen is lacking. Anther lobes broad and are slightly separated, dithecous, dorsifixed,
introrse.
Gynoecium: Bicarpellary, syncarpous, bilocular in very early stages but later on becomes
quadrilocular due to the formation of false septum. Each locule with one locule and axile
placentation is found. Ovary is superior and 4 lobed. Style is long and gynobasic and come
up between 4 parts of the ovary. Stigma is bifid. A four-lobed hypogynous disc is present
below the ovary.
Fruit: Schizocarpic (carcerulus), made up of four nutlets.
Floral characters:
Inflorescence: Racemose, mostly spike.
Flower: Bracteate often very showy, hermaphrodite, zygomorphic, epigynous, A few
modifications are due to hyper trophy, adhesion or suppression.
Perianth: Six tepals in two whorls, free or variously combined usually fleshy.The posterior
segment of inner whorl is always more developed and known as labellum. Mostly labellum
remains provided with a spur, secreting nectar. Labellum comes to the anterior because of the
twisting ovary and serves as the landing stage for insects.
Androecium: Consisting of 3 stamens uniting with the pistil to form the gynoecium. There is
one functional stamen, anther two celled, opened by longitudinal slits. The pollen grains are
united to form pollina.
Gynoecium: Tricarpellary (consist of three carpels), syncarpous, ovary inferior and
unilocular (rarely trilocular). Parietal placentation is found. Three stigma, out of which two
lateral ones receptive or fertile, third one is sterile and transformed into small beaked
outgrowth the restillum.
Fruit: Capsule
Seed: Minute non endospermic.
Floral formula:
Φ, , P3+3 or (3+3), A3or 2,G(3)
2. Petalloid perianth------------------------Coronarieae
d. 1. Leaves are alternate or rarely opposite to whorled
2. Racemose inflorescence---------------------------Orchidales
e. 1. The stem is erect, sometimes climbing
2. Fleshy leaves
3. Anther two celled, opened by longitudinal slits --------Orcihdaceae.
g. 1. Stamens uniting with the pistil to form the gynoecium
2. The pollen grains are united to form pollina.
3. Ovary inferior and unilocular
4. Minute non endospermic ------------------------------- Orchis latifolia
Floral characters:
Inflorescence: Spike of spikelets. Each spikelet consists of a pair of glumes. There are many
inferior palea or lemma, superior palea and enclosing the lodicules, stamens and gynoecium.
Flower: Bracteate (lemma or inferior palea), bracteolate (superior palea), sessile, complete,
hermaphrodite, zygomorphic, hypogynous, small and inconspicuous. Lemma is prolonged
into a long awn.
Perianth: Perianth absent, however the lodicules may be considered as highly reduced
perianth.
Androecium: Consisting of 3 stamens, polyandrous, one anterior and two posterolaterally
placed. Long filament is come out of the flower, dithecous, versatile, introrse.
Gynoecium: Monocarpellary, syncarpous, ovary superior. Unilocular with single ovule.
There are two styles. There are two feathery stigmas arising from lateral parts of the pistil.
Fruit: Caryopsis.
Seed: Endospermic.
Floral formula:
3. Presence of glumes------------------------Glumiflorae
d. 1. Inflorescence is spike of spikelets
2. Fruit caryopsis
3. Awned flowers-------------------------- ----Poaceae.
g. 1. Stem is jointed and hollow
2. Leaves with ligule
3. Inflorescence is spike
4. Feathery stigma-------------------------------- Triticum aestivum
Floral characters:
Inflorescence: Racemose raceme with its erect flower, cylindrical, fleshy, long peduncle or
scape.
Flower: Bracteate, ebracteolate, pedicillate, complete, hermaphrodite, actinomorphic,
trimerous, small and white.
Perianth: 6 Tepals, arranged in two whorls of 3 each, polyphyllous, petalloid, oblong. Tepals
are white in colour and midrib brownish and ridged. Valvate aestivation is found.
Androecium: Consisting of 6 stamens, arranged in two whorls of 3 each, polyandrous,
epiphyllous and are attached just opposite to each perianth lobe. Filaments are of unequal size
as the larger of outer whorl than that of inner whorl, dithecous, versatile, introrse, white.
Gynoecium: Tricarpellary, syncarpous, trilocular superior ovary. There are two ovules in
each locule. Trifid yellowish stigma on filiform style
Fruit: A capsule
Seed: Endospermic.
Floral formula:
1.4 SUMMARY
1. With the huge variety of plants surrounding us, it is extremely essential to pinpoint a
particular plant of our interest by noting the similarities or differences with other plants.
Thus it becomes extremely necessary that the plant is first identified, given a proper name
so that we can communicate our ideas about it, and also know the group to which the
plant belongs.
2. Taxonomy means classification following certain rules or, principles. But it is very
important to note that a plant‘s name is the key to its literature, and grouping can only be
possible when its identity is revealed and is named for the sake of convenience and
communication of ideas about it.
3. The term taxonomy was first introduced to the plant science in 1813 by A. P. de
Candolle, which was about the plant classification. But later this term became more
inclusive and at present it includes identification of plants, their nomenclature and
classification. Traditionally taxonomy was based largely on gross morphological features
of a plant.
4. The three functions of taxonomy include, identification, nomenclature and classification.
Its main aim is to provide a convenient method of identification and communication
about a taxon and provide a classification which is based on natural affinities of plant as
far as possible.
5. The word ‘taxon’ (taxa) was first used by a German Biologist Adolf Meyer in 1926 for
animal groups. It was later proposed for the plant system in 1948 by Herman J. Lam. It is
a taxonomic group of any rank, e.g. family, genus, species, subspecies, etc.
6. Identification of a taxon is a prerequisite for any study based on it. It is the determination
of a taxon based on overall similarities and differences with other taxa. Identification is
generally done by comparing representative specimen of a given taxon with the help of
key descriptions, illustrations, etc.
7. In the present chapter we have described 12 families in semi technical language and now
we are going to summarize the identification of these 12 families as per in the syllabus as
following:-
Ranunculaceae: Herbs or climbing shrubs; Tetra-Pentamerous flowers; Gynoeciumα-
1; fruit simple or etario of achenes
Caryophyllaceae: Herbs; stem with swollen nodes; leaves sessile, opposite; Flowers
bracteate, bracteolate, pentamerous; Actinomorphic, sepals persistent; corolla
caryophyllaceous; Androecium(A)5+5; free central placentation
Rutaceae: Shrubs, trees; leaves with glandular dots; stamens 8-10, obdiplostamonous
or many and polyadelphous; disc nectar secreting; fruit hesperidium
Rosaceae: Alternate and stipulate, pinnately compound leaves; flowers pentamerous;
calyx persistent; stamens many; Rosaceous corolla; perigynous; polycarpellary,
apocarpous gynoecium; fruit etario of achenes
Fabaceae: Climbing plants; zygomorphic flowers; papilionaceous corolla;
monocarpellary ovary; marginal placentation; Androecium- A(9)+1, diadelphous
Asclepiadaceae: Leaves opposite, Leaves and stems with latex; Actinomorphic
flowers; epipetalous stamens; presence of gynostegium; marginal placentation; corolla
not hypocrateriform; staminal corona is present
Solanaceae: Leaves alternate, exstipulate; actinomorphic flowers; carpels obliquely
placed; swollen placenta; corolla rotate or campanulate; several ovules in each locule,
axile placentation; fruit berry
Acanthaceae: Opposie decussate leaves; flowers bilipped; corolla bilabiate personate;
Androecium – A2 or 2+2; seeds with jaculators (hooks)
1.5 GLOSSARY
Achene – A small, dry, one-seeded, indehiscent fruit (one that doesn‘t split open)
Acuminate – The shape of a tip (apex) or base of a leaf or perianth segment where the
part tapers gradually and often in a concave manner.
Acute – Evenly narrowed into a point at an angle of less than 90 degrees.
Adventitious – Arising from an unusual or irregular position, such as roots along a stem.
Alternate – Arrangement of leaves or parts one at a node, as leaves on a stem. For
comparison, opposite or whorled
Ament – A catkin, or scaly spike.
Angiosperm – Having seeds borne within a pericarp.
Anther – Pollen-bearing part of a stamen, borne at the top of a filament.
Apetalous – Without petals, e.g. flowers of grasses.
Apex – The tip or terminal end.
Apical – Describes the apex or tip.
Auriculate – Having ear-like appendages, as the projections of some leaf and petal
bases.
Axil – The angle between a stem and an attached leaf.
Axis – The main stem.
Axillary – Borne or carried in the axil.
Berry – A fleshy, indehiscent, pulpy, multi-seeded fruit resulting from a single pistil, e.g.
tomato.
Bipinnate – Twice pinnate, the primary leaflets being again divided into secondary
leaflets.
Bloom – A waxy coating sometimes found on a stem, leaf, flower or fruit surface,
usually of a grayish cast and easily removed.
Bract – A much-reduced leaf, often scale-like and usually associated with a flower or
inflorescence
Caducous – Falling off very early as compared to similar structures in other plants.
Calyx – The outer whorl of perianth, composed of the sepals, usually green in color and
smaller than the inner set.
Capsule – A dry dehiscent fruit produced from a compound pistil,
Catkin – A spike-like inflorescence, comprised of scaly bracts subtending unisexual
flowers, often somewhat flexuous and pendulous,
Ciliate – Marginally fringed with hairs, often minutely so, and then termed ―ciliolate.‖
Compound leaf – A leaf of two or more leaflets.
Connate – Describing similar structures united or fused together.
Corolla – Inner whorl of the perianth, between the calyx and the stamens; a collective
term for the petals of a flower.
Cotyledon – The primary leaves of the embryo, present in the seed. One of the first
leaves to appear after germination (there may be more than 1).
Cyme – A more or less flat-topped determinate inflorescence whose outer flowers open
last. Dehiscent – Splitting open. The term is commonly applied to anthers or seed pods.
Determinate – Describes an inflorescence in which the terminal flower blooms first,
thereby halting further elongation of the flowering stem.
Dimorphic – Having two forms.
Drupe – A fleshy, indehiscent fruit whose seed is enclosed in a stony endocarp, e.g. date,
cherry.
Entire – Having a margin without teeth or lobes.
Filiform – Long and very slender; thread-like.
Fruit – Technically a ripened ovary with its adnate parts, the seed-containing unit
characteristic of all Angiosperms.
Genus – A group of species possessing fundamental traits in common but differing in
other lesser characteristics; a taxonomic grouping of similar species (pl. genera); similar
genera are grouped into families.
Glabrous – Not hairy.
Glandular – Bearing glands.
Hairy – Pubescent with long hairs.
Imperfect – A flower that lacks either stamens or pistils.
Inferior – Beneath, below; said of an ovary when situated below the apparent point of
attachment of stamens and perianth.
Inflorescence – The arrangement of flowers on the axis.
Lanceolate – Much longer than wide, broadest below the middle and tapering to the
apex.
Latex – Milky sap.
Margin – The edge of a leaf.
Marginal – Pertaining to the margin.
Native – Inherent and original to an area; pre European influence in the United States..
Node – A joint on a stem, represented by point of origin of a leaf or bud; sometimes
represented by a swollen or constricted ring, or by a distinct leaf scar.
Nut – A dry, indehiscent, 1-celled, 1-seeded fruit having a hard and bony mesocarp, the
outermost endocarp may be fibrous or slightly fleshy.
Opposite – Describing leaves that are situated in pairs at a node along an axis.
Ovate – Egg-shaped in outline, broadest below the middle.
Pedicel – Stalk of a single flower in an inflorescence.
Peduncle – Stalk of a flower or inflorescence.
Perianth – A collective term embracing both the calyx and corolla
Pericarp – A term used by some to designate a fruit; technically, the ovary wall.
Pinna – The leaflet of a compound leaf; in ferns, the primary division attached to the
main rachis; feather-like.
Raceme – A simple indeterminate inflorescence, having a single long axis, with
pedicelled flowers.
Reflexed – Bent abruptly backward or downward.
Schizocarp – A dry dehiscent fruit that splits into two halves.
Sepal – A single segment of a divided calyx.
Sessile – Without a stalk.
Simple – Said of a leaf when not compound, of an inflorescence when unbranched.
Solitary – Borne singly, not paired or clustered.
Species – A natural group of plants composed of similar individuals which can produce
similar offspring; usually including several minor variations.
Spike – A unbranched, elongated, simple, indeterminate inflorescence whose flowers are
sessile; the flowers may be congested or remote.
Spikelet –The floral unit, or ultimate cluster, of a grass inflorescence comprised of
flowers and their subtending bracts.
Stamen – Male or pollen-bearing organ of a flower, composed of filaments and anthers.
Stipule – A basal appendage of a petiole, usually one at each side, often ear-like and
sometimes caducous.
Tendril – A modified stem or leaf, usually filiform, branched or simple, that twines
about an object providing support.
Tepal – A segment of perianth not differentiated into calyx or corolla
Terminal – At the tip or distal end.
Umbel – An indeterminate inflorescence, usually but not necessarily flat-topped with the
pedicels and peduncles (termed rays) arising from a common point, resembling the stays
of an umbrella.
Undulate – Wavy, as in a leaf margin.
Unisexual – Bearing either stamens or pistils but not both.
Valvate – Meeting at the edges without overlapping, as leaves or petals in the bud.
Whorl – Arrangement of three or more structures arising from a single node.
Woolly – Having long, soft, more or less matted hairs; like wool.
6. stands for-----------.
7. Superior ovary is represented by ----.
8. Stellaria media Cyrill. is commonly known as-------------.
9. Nine stamens fuse to form a sheath round the pistil while 10thstamenis free might be
represented by -----.
10. Presence of two cotyledons is the characteristic feature of ----------
11. In Papilionaceae corolla are.
12. Flowers of Orchis latifolia are----------------.
1.7 REFERENCES
Gairola Sumeet, Sharma*C.M., Rana C.S., Ghildiyal S.K. and Suyal Sarvesh. 2010.
Phytodiversity (Angiosperms and Gymnosperms) in Mandal-Chopta Forest of Garhwal
Himalaya, Uttarakhand, India. Nature and Science, 8(1)
Chandra S. Rawat D. S. 2016. Drymaria villosa (Caryophyllaceae) new record for the
flora of the Western Himalaya. Journal of Asia- Pacific Biodiversity, 9(1): 97-99.
Links:http://www.biologydiscussion.com
https://en.wikipedia.org/wiki/flowering plants
1. Describe the flowering plants with special reference to their availability in Uttarakhand.
2. Describe the process of identification.
3. With the help of floral diagram and formula describe following families:
a. The chick weed family
b. The orange family
c. The pea family
d. The rose family
e. The milk weed family
4. Describe the floral description of available plant of Acanthus family in Uttarakhand.
5. Describe the Mint family.
6. Define placentation. Write some important points for following placentation types:
a. Basal placentation
b. Marginal placentation
c. Axile placentation
7. Describe the vegetative and floral characters of orchid family member of your locality.
2.1 OBJECTIVES
2.2 INTRODUCTION
In this unit we will try to know about plant specimen and its types, which are mostly used as
an example of a species or a type for scientific study or display. The specimens may be in the
form of whole plant or plant parts. These are usually in dried form by mounting on a sheet of
paper but depending upon the material, may also be stored in boxes or kept in
preservatives. The specimens in a herbarium are often used as reference material in
describing plant taxa.
Plant collection is the prerequisite for preparing the plant specimens for the purposes
of research, cultivation, or as a hobby. Plant specimens may be kept alive, but are more
commonly dried and pressed to preserve the quality of the specimen. Plant collection is an
ancient practice with records of a Chinese botanist collecting roses over 5000 years ago.
Herbaria are collections of preserved plants samples and their associated data for scientific
purposes. The largest Herbarium in the world exist at the National Museum of Natural
History in Paris, France.
The main museum is located in Paris, on the left bank of the River Seine. It was
founded in 1793 during the French Revolution, but was established earlier in 1635. As of
2017, the museum has 14 sites throughout France, with four in Paris, including the original
location at the royal botanical garden; the Garden of Plants (The Jardin des Plantes) is the
main botanical garden in France.
Plant samples in herbaria typically include a reference sheet with information about
the plant and details of collection. This detailed and organized system of filing provides
horticulturist and other researchers alike with a way to find information about a certain plant,
and a way to add new information to an existing plant sample file.
The collection of live plant specimens from the wild, sometimes referred to as plant
hunting, is an activity that has occurred for centuries. The earliest recorded evidence of plant
hunting was in 1495 BC when botanists were sent to Somalia to collect incense trees for
Queen Hatshepsut. In historical past botanical adventurers were made to explore the world to
find exotic plants and their domestication often at considerable personal risk. These plants
usually ended up in botanical gardens or the private gardens of wealthy collectors.
2.3.1-Herbarium
A herbarium consists of preserved plant specimens, each with a label bearing documentary
information. Specimens are used as references for comparison and identification with
unknown samples.
Herbarium (plural: herbaria), the term can also refer to the building or room where
the specimens are housed, or to the scientific institute that not only stores but uses them for
research (live also).
The credit goes to an Italian taxonomist Luca Ghini (1490-1556) for his initiative
efforts with reference to explore the Herbarium concept. The oldest traditions of making
herbarium collection have been traced to Italy. During 1532, Luca Ghini and his student
Gherardo Cibo created herbarium which is also kept in Rome in the form of oldest preserved
herbarium. During this period Luca Ghini visited various parts of Italy for collecting many
plant specimens and the first herbarium of world was established in 1545 in University of
Padua, Italy. Most of the early herbaria were prepared with sheets bound into books. It was
continued till the time of Carolus Linnaeus who came up with the idea of maintaining them
on free sheets that allowed their easy re-ordering within cabinets. Nowadays the plants are
mounted on single sheet and arranged according to the classification. Main objectives of
collecting plants in the field and preserving them in herbarium with their proper
documentation including notes that give maximum information about the plants.
Fig. 2.1 Selection of a specimen (Try to collect both flowers and fruit also if available)
For collection of the plants one should go out on excursion several times in a season.
We should have commonly used equipment during excursion practice. A list of these
equipments is being given below:
• scissor to cut and trim specimens( Fig.2.2).
• A khurpi for digging up roots and underground stems
• A knife
Fig.2.2 For collection secateurs are used for clean cut of the stem
• A field notebook and pencil. This can be a pocket-sized notebook or a book of pre-printed
specimen labels may be used.
• Large and small plastic bags to hold specimens temporarily
• Small brown paper bags for collecting fruits, seeds, bryophytes and lichens
• A hand lens
• Tie-on tags, often called jeweller‘s tags
• Felt tipped pens and pencils for numbering collection and writing notes
• A camera/phone for photographing the form of the plant, flower colour and its natural
habitat.
We should check the plant closely to make sure all soil is removed from the roots and
remove excess moisture with a paper towel. If the plant is less than 12 inches long, place it in
the folded newspaper. Arrange the stems, leaves, roots and flowers exactly as you want them
to appear on the mount. Flowers should be pressed open. Both the upper and lower surfaces
of flowers and leaves should be displayed. If the plant is longer than 12 inches, it will be
necessary to fold the plant in the shape of a V, N or W.
Re-examine the plant after it has been pressed for 24 hours. This will be our last
opportunity to do some rearranging while the plant is still flexible. Proper observations are
needed by changing the newspaper or blotter paper every day until the plant is thoroughly
dry. We should remember one important thing that succulent (fleshy) plants will take much
longer time to press. Plants can be removed from the press in seven to 10 days. Keep the
plants in folded newspaper until you are ready to mount them.
containing germ plasm of forty species of indigenous and exotic bamboos. It was started by
Gamble (1890), and today the herbarium of the FRI has grown to become one of the largest
herbarium of Asia. Today it holds 3,25,000 authenticated plant specimens, including 1300
type specimens, as well as a carpological collection.
2.3.2-Live Specimens
Long before the term ―biodiversity‖ was used, botanical gardens carried out activities that are
now associated with biodiversity. For the collection of live specimens botanical gardens are
being established. Botanical gardens took part in describing new species and studied them to
discover their potential uses in industry, horticulture or for research. Gardens also conserved
species of rare wild plants (or ex situ conservation, meaning outside of their natural habitat).
In botanical gardens we can conserve endangered plant species through live
collections as well as through seed banks. These benefit pollinators like butterflies,
honeybees, bats, and birds, which play an important role in the pollination of crops.
According to the International Agenda for Botanic Gardens in Conservation (IABGC) (2000),
Botanic gardens are institutions holding documented collections of living plants for the
purposes of scientific research, conservation, display and education.‖
A botanical garden must be a public institution committed to long-term maintenance
of its collections. Botanical gardens have a unique environment to raise public awareness and
help people understand the importance of biodiversity, educate people about the threats it
currently faces and make them realize that nature conservation is everyone‘s job. This is why
it is so important for gardens to maintain interpretation programs, host school groups and
present exhibitions. The major role of botanical gardens in biodiversity conservation is ex
situ conservation. Ex-situ conservation (growing wild plants outside their natural
environment) has many advantages, but should not be seen as an objective in itself. It is
referred to be as one important element of a comprehensive strategy to conserve species in
their environment. Ex situ conservation helps to attain this objective by providing material to
reintroduce plants into degraded areas or to reinforce existing populations.
Botanical gardens have three main objectives:
The first and best known objective is recreation. Exhibitions, plant sales, picnics under
the trees and relaxing in a natural environment are some of the possibilities that botanical
gardens offer both residents and tourists.
The second very important objective of botanical gardens is education. This includes
summer camps for kids, school group tours, interpretation, classes and seminars as well as
publications and other ways of sharing information between botanical gardens and
horticulture and botany professionals.
Finally, gardens have a scientific objective. Today, fields of study are even broader, from
molecular research in the lab to ecological field work. Conservation and study of local
plants should also be given emphasis.
At present there are more than 600 botanical gardens all over the world. Major
botanical gardens of the worlds and India are being described here under:
garden was established by Nawab Saadat Ali Khan (1784-1814) as a Royal Garden. It was
established in its new form in 1946 by Prof. K. N. Kaul and today is well known as
NBRI(National Botanical Research Institute) Lucknow. It shows the diversity of plants,
comprising a collection of 6,000 indigenous, ornamental and exotic taxa.
The plant wealth of the Botanic Garden is displayed in the arboretum, conservatory,
cactus and succulent house, palm house, bonsai section, fern house and new conservatory.
2.4 SUMMARY
1. The term herbarium was given by Linnaeus. Plant samples can be dried or preserved in
liquid. Plant samples can also be kept alive in greenhouse or garden.
2. A herbarium consists of preserved plant specimens, each with a label bearing
documentary information. Herbaria are repositories for vascular plants, bryophytes,
lichens, algae, and fungi.
3. Specimens are used as references for comparison and identification with unknown
samples.
4. The method of preparation and storage depends on the type of plant being processed.
Most specimens are mounted on standard herbarium sheets.
5. They include reproductive and vegetative organs, features critical to identification.
6. Some herbarium specimens are known as a ‗voucher specimens‘. Voucher specimens
serve as a basis of scientific study.
7. Voucher specimens are collected from taxa that are the subject of research or
investigation, generally resulting in a publication in a scientific journal or report. The
herbarium specimens bear labels with adequate data on habit and habitat, common name,
native uses etc.
8. Herbarium specimens are permanent records of a particular locality. Therefore, we should
be more careful during the selection and collection of plant samples.
9. Thereafter herbarium specimens should be properly prepared, preserved and maintained.
10. For the collection of live specimens botanical gardens are being established.
11. In botanical gardens we can conserve endangered plant species through live collections as
well as through seed banks.
12. A botanical garden must be a public institution committed to long-term maintenance of its
collections.
13. Botanical gardens have a unique environment to raise public awareness and help people
understand the importance of biodiversity.
14. Gardens carry out interpretation programs, host school groups and present exhibitions.
15. The major role of botanical gardens is biodiversity conservation as ex situ conservation.
2.5 GLOSSARY
Plant specimen: An individual animal, plant, piece of a mineral, etc. used as an example of
its species or type for scientific study or display.
Herbarium: a reference collection of pressed, dried (preserved), botanical specimens.
Preservation: The act of keeping something the same or of preventing it from being
damaged
Maintenance: the process of preserving a condition or situation or the state of being
preserved.
Species: the narrowest taxonomic grouping; a group of closely related animals or plants that
are capable of interbreeding.
Mounting: A backing, setting, or support for something.
Acquisition: An asset or object bought or obtained, typically by a library or museum.
Cultivation: The process of promoting the growth of a biological culture.
Ancient practice: The practice was more common in ancient times than it is now
Jardin des Plantes: Garden of plants is the main botanical garden in France.
Botanical garden: A garden for the exhibition and scientific study of collected plants,
usually in association with green houses, herbaria, laboratories etc.
Filing: A filing is when a legal document becomes part of the public record.
Domestication: The process of adapting wild plants for human use.
Reference material: Reference materials are various sources that provide background
information or quick facts on any particular topic.
Vigorous: grows with great enthusiasm.
Vascular plant: a plant with vascular tissues (xylem and phloem)
Bulbous plant: plant growing from a bulb
Repositories: a place where things are stored and can be found.
Sterile plants:the plant does not produce seeds
Conservation: The protection of animals, plants, and natural resources
Voucher specimens: a specimen maintained in a collection or herbarium that is associated
with specific research or referred to in a report; may include type specimens, or specimens
from a flora or consultant
8. Which chemical might be used as an insect repellent for the safety of herbarium.
2.6.2 Answers key: 1. The specimens; 2. Plant collecting; 3. National Museum of Natural
History; 4. A herbarium; 5. Luca Ghini; 6. A khurpi; 7. GPS; 8. Royal Botanic Garden; 9.
Indian Botanic Garden, Calcutta; 10. Botanical gardens; 11. Royal Botanic Garden Sydney;
12. Victoria regia; 13. Saharanpur Botanical Garden
2.7 REFERENCES
Bridson, D. and L. Foreman, eds. The Herbarium Handbook. Royal Botanic Gardens,
Kew, Great Britain. Third edition. 1998.
3.1 OBJECTIVES
After reading this unit, students will be able-
To study the structure of Flower
To study the male reproductive part of Flower
To study the T. S. of Anther
To understand the procedure for preparing the T. S. of Anther
3.2 INTRODUCTION
The angiosperms are seed-bearing plants that produce flowers. The seeds, which contain the
plant embryo, are produced in the flower. All the parts of a flower are actually modified
leaves that are specialized for their roles in the reproductive process. Let us try to understand
a typical flower with the help of Fig.3.1.
Flower parts are arranged in circles called whorls. They are attached at the enlarged
base of the flower, the receptacle. As we know that flowers are made up of both sterile and
fertile parts which are arranged in four whorls. These include the calyx, the corolla, the
androecium and the gynoecium. Both the calyx (collective term of sepals) and corolla
(collective term of petals) are the sterile parts, while the androecium and gynoecium are the
fertile structures.
Basically, the androecium is referred to be the third set of floral organs composed of
stamens or microsporophylls. Ordinarily, each stamen is composed of a slender stalk-like
filament supporting a knob-like spore case or the anther. Each anther consists of two lobes
(anther lobes) connected by a tissue (connective) which can be in some cases clearly seen on
the dorsal side as an extension of the filament. Each anther lobe, again, has two pollen sacs or
pollen chambers (microsporangia) placed longitudinally. Special cells within the pollen sacs
undergo meiosis to form pollen grains. Each pollen grain contains two male gametes. When
the pollen grains mature, the pollen sacs split open to release the dust-like pollen.
The pistil (carpel) is the female reproductive organ and consists of three parts: the
stigma, style, and ovary. The stigma is an enlarged receptive part at the top of the pistil that
becomes moist and sticky when mature. The style is the middle thin portion of the pistil. It
can be long and slender, short, or even absent, depending upon the species. The ovary is the
enlarged structure at the bottom of the pistil. The ovary contains one or more hollow
compartments called locules. Each locule contains one or more ovules. Embryo sac (female
gametophyte) is present in each ovule which has one egg.
Pollination occurs when pollen grains land on the sticky surface of the stigma and are
trapped there. The pollen grain germinates and a pollen tube emerges due to the release of
enzymes by stigmatic surface that digest the cell wall of pollen grain. The pollen tube grows
down through the style to the ovary and enters the ovule, making a continuous passage for the
two male gametes to enter the embryo sac inside the ovule. Fertilization occurs by fusion of
male gamete with egg.
The fertilized egg ultimately develops into an embryo. The wall of the ovule
thickens and forms a seed, thus enclosing and protecting the embryo. The ovary develops
into a fruit.
After getting a concise knowledge about a flower, we will try to study the
morphological features of the flower. For this purpose we will obtain a single flower and
observe its parts carefully.
The sepals form the outermost whorl of the flower. The sepals are leaf-like structures
that are usually green in color. Sometimes, the sepals are the same color as the petals, or
appear to be another set of petals of a different color. The function of the sepals is to protect
the inner part of the flower before it blossoms. Gently remove the sepals, tape them into
position onto the paper, and label them. On the chart, observations should be recorded.
The petals are found directly under the sepals. The color and odor of the petals help
to attract birds and insects to the flower for pollination. Gently remove the petals, tape them
into position onto the paper, and label them. On the chart, observations are recorded.
The stalk-like structures inside the petals are the stamens, the male reproductive
part. Depending on the species, the stamens may be attached to the receptacle, to the petals,
or to the pistil. The enlarged portion at the top of the stamen is the anther. Inside the anther
are pollen sacs, which produce pollen grains. When the pollen grains mature, the pollen
sacs split open, releasing the dust like pollen grains. The filament is the thin structure that
supports the anther.
After examining flower morphologically let us try to know more about the stamen-
Stamens (Fig.3.2) are the male reproductive organs of a flower. Each stamen consists
of an anther borne on a stalk-like filament. The anther dehisces at maturity in most of the
angiosperms by a longitudinal slit to release the pollen grains. The pollen grains contain the
highly reduced male gametophyte. These microgametophytes carry of male gametes that play
a key role in plant reproduction during the process of double fertilization.
Fig.3.2 Stamen: A ventral view; B. Dorsal view; c. Three dimensional cut section of anther
3.3 T. S. OF ANTHER
The transverse section of Anther (Fig.3.3) reveals that the mature anther wall is made up of
the following four layers:-
Epidermis
Endothecium
Middle layers
Tapetum
3.3.1 Epidermis
The epidermis is the outermost layer of the anther and made up of tangentially stretched and
flattened cells. Epidermis has a protective function. The epidermis prevents water loss from
the anther, together with the endothecium provides structural support to the anther and plays
a role in the anther dehiscence (Goldberg et al. 1993). In a mature anther, the epidermal cells
are greatly stretched and flattened. In xerophytic plants, the epidermal cells are stretched to
such an extent that these cell loose contact among themselves and appear as withering
remains in a mature anther. The epidermal cells in the stomium region differentiate into
small, specialized cells that split at maturity to facilitate dehiscence and release of pollen
grains (Fig.3.4).
3.3.2 Endothecium
Endothecium also known as the subepidermal layer is the hypodermal layer that persists in
the mature anther. Endothecium is usually single layered having radially elongated cells
which attain maximum development when the anther is ready to dehisce for the discharge of
mature pollens. The radial and inner tangential wall of endothecium cells are characterized by
deposition of fibrous thickening bands. The outer tangential walls remain thin.
The endothecial cells at the junction of two pollen sacs (stomium) of anther lobe lack
thickening in case of longitudinally dehiscing anthers. Thus the presence of fibrous bands,
differential expansion of tangential wall layers and hygroscopic nature of endothecial cells
play an important role in the dehiscence of anthers.
3.3.4 Tapetum
Tapetum is the innermost layer of the anther wall and is present in the form of a homogenous
layer that completely surrounds the sporogenous tissue. It is usually single layered and has
several nutritive and secretory functions related to pollen development and pollen
germination. In many angiosperms, the tapetum is of dual origin. The outer portion of the
tapetum (Fig.3.5), is contributed by the parietal layer (P-Tepetum) while the inner portion is
derived from the connective tissue (C-Tapetum). The tapetum cells contain prominent nuclei
and dense cytoplasm with an abundance of organelles such as mitochondria, plastids,
endoplasmic reticulum, dictyosomes, vesicles and ribosomes.
3.4 PROCEDURE
For making neat and clean slide of Anther (T. S. of Anther), we should take few
precautionary steps. These steps involve fine handling of plant material and a complex multi-
stage process of staining to prepare microscope slides. This will depend on the amount and
type of anther material available. Following are the major requirements that should be
available with us-
High power microscopes
Suitable plant material as a source of anthers
Plain slides
Cover slips
Staining solutions as safranin or fast green
Remove the small white petals that are around the outside of the flower and expose the
ring of stamens in the middle of the flower. In some flowers, the stamens may themselves
be attached to very small petals, do not discard these by mistake.
3.5 SUMMARY
The angiosperms are seed-bearing plants that produce flowers. The seeds, which contain the
plant embryo, are produced in the flower. All the parts of a flower are actually modified
leaves that are specialized for their roles in the reproductive process. Flower parts are
arranged in circles called whorls. They are attached at the enlarged base of the flower, the
receptacle.
As we know that flowers are made up of both sterile and fertile structures arranged in
four whorls. Both the calyx and corolla are the sterile structures of a flower, while the
androecium and gynoecium are the fertile structures.
The unitof the androecium is called the stamen and is the male structures in the
flower. The stamen is made up of the filament and the anther. The filaments are the slender
stalks and the anther is at the top of the stamen that contains pollen. The anthers often appear
as yellowish because they contain pollen grains.
The well-differentiated anther wall comprises an epidermis, an endothecium, 1-3
middle layers and the tapetum. The epidermis is protective, The endothecium develops
fibrous bands of lignocellulosic secondary thickening that provides the mechanical force for
anther dehiscence. The middle layers are short-lived and get crushed during pollen
development. The cells store nutrients for the developing pollen. Tapetum is the inner most
nutritive layer which plays a crucial role in pollen development.
3.6 GLOSSARY
Angiosperm: A plant of a large group that comprises those that have flowers and produce
seeds enclosed within a carpel, including herbaceous plants, shrubs, grasses, and most trees.
Receptacle: The modified or expanded portion of the stem or axis that bears the organs of a
single flower or the florets of a flower head.
2. The layer of cells present below the epidermis of a microsporangium is known as………
3. Each microspore mother cell undergoes ………. and forms four haploid microspores.
4. The process of formation of microspors from the sporogenous tissue is known as ……
5. The fertilized egg becomes an ………
6. Special cells within the pollen sacs undergo meiosis to form ………...
7. The outer portion of the tapetum is contributed by the parietal layer reffered as ……
8. ……………of endothecial cells play an important role in the dehiscence of anthers.
3.8 REFERENCES
Bharti Chaudhry and MR Vijayaraghavan (1995) Structure and Development of Anther,
Pollen and Exinal connections in Jojoba (Simmondsiachinensis) Proceedings of Indian
National Science Academy B61 No3 pp199-208.
Goldberg R, Beals T, Sanders P (1993) Anther development: basic principles and
practical applications. The Plant Cell 5, 1217–1229.
Teagen D. Quilichini, Carl J. Douglas and A. Lacey Samuels (2014) New views of
tapetum ultrastructure and pollen exine development in Arabidopsis thaliana Annals of
Botany 114: 1189–1201.
R. J. Scott, M. Spielmanand H. G. Dickinson(2004). Stamen: Structure and Function. The
Plant Cell, Vol. 16, S46–S60, (Supplement)
4.1 OBJECTIVES
4.2 INTRODUCTION
When using a microscope, slides that are permanent can be examined and stored for a long
time, while temporary slides are used for short time observations. Permanent slides must be
properly made for successful long-term storage. Specimens must be finely sectioned and
properly preserved for preparing a permanent slide.
Most permanent slides use the semi-solid form of mounting medium, which is the
most stable. Liquid mounting mediums can also be used on permanent slides. This form
suspends the specimen in liquid and uses nail polish to fix the cover slip to the slide. Nail
polish makes the slide semi-permanent. It is permanent if left intact and temporary if the
cover slip is removed, washed and dried for reuse. Slides using the liquid mounting method
must be stored horizontally.
Procedure:
1. Take a clean slide and put a drop of glycerine (10%) on the center of the slide. Excess
amount of glycerine should be removed from the slide, if present.
2. Transfer material to be mounted on the drop of glycerine with the help of a small brush. Do
this step very carefully. If the mount is not correctly placed observation under microscope
becomes difficult.
3. Apply a thin coat of glycerine on the lower surface of cover slip to remove the air of this
surface and now carefully place the coverslip over the glass slide covering the mount. Take
extra care not to crush the mount much.
4. Remove extra fluid present on the slide with the help of filter paper. This is to obtain a
clearer view on the microscope. Don't crush the coverslip, because it breaks easily.
5. Observe your mount under a microscope.
Once your slide is ready to be observed under a microscope place it in the viewing
area of microscope and view it. Adjust light to obtaina clear view.
Staining: Usually, material to be mounted is stained. Staining is generally done to get clear
image under the microscope. For staining, different stains are commonly used. Iodine
solution is commonly used for pollen studies. Take a little Stain in watch glass. Transfer
material to be stained onto the watch glass. Wait for a few minutes. Now remove the material
from the strain with the help of a brush and place it in watch glass containing clean water.
Transfer stained material in drop of glycerine on glass slide. Put coverslip as described above
and examine under microscope. When material to be stained is very small, place material in a
drop off water. Add a drop off stain to it. After few seconds add drop of glycerine and put
coverslip. Remove oozing fluid using filter paper.
Precautions:
1. Don't use excess amount of water.
2. Hold coverslip gently.
3. Use proper staining technique.
4. Don't crush the mount too much.
5. Use brush to transfer mount to slide from watch glass.
2. The section is then washed with water till no more stain dissolves and water remains
colourless.
3. Section is passed through a graded series of alcohol for dehydration. Different cavity
blocks or petri dishes or watch glasses are filled with requisite amount of alcohol, (beginning
with 30% alcohol) and the section is transferred to it. These cavity blocks or petri dishes or
watch glasses should always be covered. The section is transferred to next higher series of
alcohol after every 30 minutes which helps in gradual dehydration. In case if you don‘t want
to disturb the section, used alcohol is removed by glass dropper. All the 30% alcohol is
replaced with 50% alcohol. This procedure is repeated till 70% of alcohol grade is reached.
4. At this stage, counterstained is employed (e.g. safranin, fast green or erythrosine prepared
in 80% or 90% alcohol).
5. This stain acts quickly and as such section is washed immediately after the requisite time is
over.
6. De-staining is done by washing sections with90% or 100% alcohol.
7. The section is now transferred to absolute alcohol for complete dehydration.
8. Clearing now begins with 25% of xylol (25 cc of xylol and 75 cc of absolute alcohol). The
sections are gradually passed through xylol series of 25%, 50%, 70%, 90% and finally
transferred to pure xylol. If dehydration is not complete, pure xylol turns white or turbid. At
this stage section should be passed through reverse series.
9. Pure xylol is the last stage of clearing. Section is now ready for mounting.
10. Mounting is done in Canada balsam or DPX mountant.
Mounting an Object
Mounting is necessary to properly position an object for clear view. Lactophenol, glycerine
and glycerine jelly are used for temporary mounting while Canada balsam and DPX is used
for permanent mounting.
(a) Canada balsam: It is a resin obtained from a conifer-Abies balsamea, most suitable for
permanent slide preparation. The material to be mounted should come through alcohol
(dehydration) and xylol (clearing) series.
(b) Lactophenol: It is a mixture of equal parts of phenol crystals, lactic acid, glycerine
(sometimes two parts) and distilled water. Stains may be mixed with this medium (e.g. cotton
blue in Lactophenol used to stain fungi) or copper acetate is added to preserve green colour of
the pigment.
(c) Glycerine: Pure glycerine diluted to 10-25%is widely used. Semi-permanent and
temporary preparations are mounted in glycerine.
(d) Glycerine jelly: Jelly is also used for mounting. It is made of gelatin 1: glycerine 7 water
6.Warm the gelatin for two hours by adding water. Phenol (1 %) is added later. Add crystals
of safranin if desired. Allow the solution to cool and settle into jelly. Many other mounting
media like cedar oil, dammar, balsam, venetian turpentine and synthetic resins are also used.
Fig. 4.4 Stamen. A- Pollen showing filament and anther lobe. The anther lobe have been cut
transversely to show microsporangia and microspores (pollen grains). B- T.S. of young anther
lobe showing four microsporangia .C- T.S. of anold anther.
Fig.4.5. A- Pollen grains deposited on stigma; B- Pollen grains germinating through stigmatic
tissue forming pollen tubes
The pollen grain of flowering plants is a haploid, uninucleate cell with double
layered wall, an inner layer, the intine, and an outer layer, the exine. The intine is thin and
consists of cellulose, while the outer layer, the exine is thick, sometimes spiny, very resistant
to disintegration, and composed of sporopollenin.
(A) (B)
Fig. 4.6(A) Common pollen grain sculpturing (B) section of a mature 2 celled pollen grain of an
angiosperm.
3. Apertures: The exine of pollen grains are often provided with apertures which are thin,
more or less distinctly delimited areas formed only of a hyaline membrane.
4. Shape of pollen grain: It is determined by Px100/E formula, where P is the polar diameter
and E the equatorial diameter.
5. Exine stratification. The wall is made of intine and exine. The intine is colourless and
disappears during the slide preparation. Exine consists of two layers, the inner homogenous
layer, the endine and the outer heterogeneous layer, the ectine. The ectine is composed of
radial rods, the columellae, which are either free at their tips or are united to form a layer
called tegillum.
Fig. 4.7- Pollen units (A= Monad, B= Dyads, C= Tetrahedral tetrad, D= Tetragonal tetrad, E=
Rhomboidal tetrad, F= Decussate tetrad, G= T-Shaped tetrad, H= Linear tetrad,
I=Cryptotetrad, J = Polyads, K= Pollinia.
The pollen grains do not remain united at maturity, and are dissociated into single
pollen grain called monad. Sometimes rarer types like dyads (two pollen grains), Octads
(eight pollen grains) and Polyads (many pollen grains) are also observed.
Dyads: Pollen grains which are united in pairs and shed from the anthers as doubles are
called dyads. The dyads are formed due to the incomplete break up of individual grain or
monad.
Tetrads: Four pollen grains are united to form tetrad. Tetrads are the unseparated product of
meiosis. Tetrads maybe categorized into different types based on their arrangement.
Tetrahedral tetrad: Pollen grains are arranged in two different planes. Three grains are in
one plane and one lies centrally over the other three. In some cases, the pollen grains are
released from the anther in the tetrad condition. These types of tetrads are called obligate or
permanent tetrads, viz., Rhododendron (Ericaceae).
Tetragonal tetrad: All the four pollen grains are arranged in one plane e.g., Typha latifolia
(Typhaceae).
Rhomboidal tetrad: All pollen grains are arranged in one plane forming rhomboidal shape
e.g., Annona muricata (Annonaceae).
Decussate tetrad: Pair-wise the pollen grains are at right angle to each other, e.g., Magnolia
grandiflora (Magnoliaceae).
T-Shaped tetrad: The first division of pollen mother cell is transverse to form a dyad. The
upper or lower cell of dyad undergoes a vertical or longitudinal division instead of transverse,
yielding either straight or inverted T-shaped configuration, e.g., Polyanthes.
Linear tetrad: The first division of pollen mother cell is transverse and a dyad is formed.
Each cell of the dyad again divides transversely to form a linear tetrad, e.g., Mimosa pudica.
Cryptotetrad: Here tetrads are formed without partition walls between the four
compartments. One out of the four nuclei develops normally and the rest three obliterate.
Thus an apparent monad but homologous to the tetrad is formed also called Pseudomonad,
e.g., Cyperaceae.
Polyads: In most of the Mimosaceae members each of the tetrad cells divides once or twice
or more, yielding a group of 8 to 64 cells which remain together after maturity. These
compound grains are usually held together in small units and are called Polyadse g., Acacia
auriculiformis.
(C) Pre-treatment
1. Few drops of alcohol is added to the pollen grains to remove waxy surface from the pollen
grain and to separate them from one another.
2. The ring developed by alcohol is wiped clean with cotton moistened with alcohol.
(D) Mounting
1. A small pellet of glycerin jelly pre-stained with methyl green is taken. It is placed over the
mass of pollen grains. Coverslip is also placed over the pellet.
2. A small piece of paraffin wax (melting point 60-70°C) is placed close to the coverslip.
3. Both, jelly and wax are warmed over the flame of the spirit lamp in such a way that while
the jelly spreads a little, the remaining vacant space below the coverslip is occupied by wax.
Procedure
1. Prepare 15% sugar solution by dissolving 1.5 gm sugar in 100 ml of distilled water.
2. Add a pinch of boron to sugar solution.
3. Clean the cavity slide and place a drop of this solution in the cavity.
4. Remove mature anthers from freshly opened flowers. Crush them on a slide. Collect the
pollen grains with a brush from the crushed anthers. Dust the brush free of anthers in the
cavity filled with solution.
5. Place a cover slip over the cavity.
6. Allow the slide to remain as such for a few hours or overnight.
7. Remove the coverslip slowly. Mount the coverslip on a fresh and clean slide in a drop of
safranin. The lower side of the coverslip with germinated pollen grains should be in contact
with safranin.
8. Observe the slide.
Fig. 4.8- Pollen grains: Germination of pollen grains A. seen under the light microscope, B.
Details of the structure.
Observations
The following characters are observed.
1. Numerous germinated pollen grains are seen.
2. A pollen grain has a distinct ornamented exine with germ pores.
3. Intine lies internal to exine. It is thin and uniform.
4. Intine forms a pollen tube that comes out through one of the germ pores.
5. Pollen tube shows a vegetative nucleus and two small male gametes.
The preparation and mounting of the pollen can introduce artifacts: the pollen may lose some
of its pigment, start to shrink and shrivel or absorb water and swell. A careful preparation is
therefore necessary. There are several methods of preparing pollen grains, each one offers
advantages and disadvantages.
Mounting Techniques
(i) Glycerol wet mount: Place a small drop of glycerol on a clean slide and tap the anthers of
the plant so that the pollen falls into the glycerol. If necessary, carefully separate large chunks
of pollen grains by stirring. Place a cover slip on top and seal the sides of the cover slip with
nail polish. Use a very small amount of glycerol to make sure that the nail polish has enough
area to stick the coverslip to the slide. Glycerol wet mounted slides can be stored for months
if properly sealed with nail polish. The glycerol will withdraw water from the pollen. If the
pollen is not dry, then there is a possibility of the pollen to shrink.
(ii) Air mounts (dry mounts): In this case, no liquid mounting medium is used. A cover slip
is placed on top of the pollen grains and sealed on the side, either with nail polish or with
tape. Nail polish may flow very quickly between cover slip and slide, so it may be best to use
a nail polish of high viscosity (by letting some solvent evaporate first).
(iii) Glycerol jelly: This is a very popular mounting medium for pollen. It is phenol-free
(antiseptic additive) and therefore non-hazardous. It contains 10g of gelatin, 35ml distilled
water and 30ml of glycerol (glycerin). After mounting, the sides of the cover slip need to be
sealed. Due to the lack of an antiseptic, it is also necessary to work in a sterile manner,
otherwise there is the risk of fungal growth in the medium. It is a good to treat the pollen
grains first in alcohol to reduce the chance of fungal contamination by spores.
(iv) Non-water-based mounting media: Euparal is a mounting medium which is not water
based. Specimens which are present in alcohol can be directly transferred to Euparal. Place a
pollen suspension on the slide and let the alcohol evaporate. Before mounting pollen in
Euparalthe pollen are first washed in alcohol and then compared to the original shape.
Washing in alcohol may result in an unacceptable shrinking of the pollen or unacceptable loss
of pigments, if not, then mounting the pollen in Euparal may be an alternative.
4.3.2- Placentations
In biology, placentation refers to the formation, type and structure, arrangement or position of
the placenta. The function of placenta is to transfer nutrients, respiratory gases, and water
from maternal tissue to a growing embryo, and in some instances to remove waste from the
embryo.
In botany, the term placentation most commonly refers to the arrangement of placenta
inside the ovary. In flowering plants, placentation occurs where the ovules are attached inside
the ovary. The ovule inside an ovary is attached via funicle. The part of the ovary where the
funicle is attached is referred to as the placenta.
Types of Placentations:
1. Marginal: The ovary in which the placenta forms a ridge along the ventral suture of the
ovary and the ovules develop on two separate rows is known to have marginal placentation.
The ovules are borne along the junction of the two margins of the carpel. It occurs in
monocarpellary and unilocular ovary, e.g., Leguminosae (pea, beans).
2. Parietal: The placenta is formed by the swelling up of cohering margins, where later on
develop the ovules in rows. Here ovary is one-chambered but it becomes two- chambered due
to the formation of the false septum. The ovules develop on the inner wall of the ovary or on
peripheral part. It occurs in bicarpellary or multicarpellary but unilocular ovary, e.g., mustard,
cucurbita and Argemone.
3. Axile: The placentae develop from the central axis which corresponds to the confluent
margins of carpels. The ovary is sectioned by radial spokes with placentas in
separate locules. It occurs in bi-to multilocular ovary, e.g., Solanaceae (apple, hibiscus) and
Malvaceae.
4. Free-central: The placenta develops in the centre of the ovary as a prolongation of floral
axis and the ovules are attached on this axis. The ovules are borne on central axis and septa
are absent. It occurs in multicarpellary but unilocular ovary, e.g., Dianthus, Primula and
Sandalwood
5. Superficial or Laminar: The ovules develop over the entire inner surface of the carpels. It
occurs in multicarpellary ovary. Ovary is multilocular and syncarpous e.g., Nymphaea.
6. Basal: The placenta is at the base (bottom) of the ovary. The placenta develops directly on
the thalamus and bears a single ovule at the base of the unilocular ovary, e.g., Compositae
(sunflower).
7. Apical: where one or few ovules develop at the top of a simple or compound ovary.
Preparation of material: Dissect the ovary of freshly collected flower. Cut the T.S. of
ovary, mount it on a slide and observe the type of placentation.
Procedure:
1. Take a clean slide and put a drop of water on the middle of the slide. The drop of water is
where the mount is to be transferred to.
2. Transfer material to be mounted on the drop of water with the help of a small brush. Do
this step very carefully. If the mount is not correctly placed observation under microscope
becomes difficult.
3. Add glycerine to the mount. Now carefully place the coverslip over the glass slide
covering the mount.
4. Remove extra fluid present on the slide with the help of filter paper.
5. Observe your mount under the microscope.
Fig.4.11 Detailed Diagram showing placentations: (a) Marginal, (b) Parietal, (c)Axile, (d) Free-
central, (e) Basal, (f) Superficial.
Observations study:
1. The Ovary consists of the ovary wall, the locule or locules, and in a multilocular ovary, the
partitions.
2. The ovules are found to be situated on the inner or adaxial (ventral) side of the ovary wall.
3. The ovule-bearing region forms the placenta.
4. In a carpel the placenta occurs close to the margin (Marginal).
5. The ovules develop on the inner wall of the ovary or on peripheral part (Parietal).
6. The ovary is sectioned by radial spokes with placentas in separate locules (Axile).
7. The ovules are borne on central axis and septa are absent (Free-central).
8. The ovules develop over the entire inner surface of the carpels (Superficial).
Placentation can also be seen (generally more easily) from the observation of older
ovaries, and fruits (while stamens have to be observed on fresh or even non-open flower). But
sometimes, septa tend to secondarily disappear in ovaries with axile placentation. Thus when
a cross-section of ovary or a fruit show only one locule, it is necessary to observe a
longitudinal section of the ovary to say whether the placentation is free-central or axile.
4.3.3- Ovule
Components of ovule:
In seed plants, the ovule ("small egg") is the structure that gives rise to and contains the
female reproductive cells. It consists of three parts: The integument forming its outer layer,
the nucellus, and embryo sac or female gametophyte formed from haploid megaspore at its
center.
The Nucellus
The nucellus is the largest part of the ovule. It houses the embryo sac as well as nutritive
tissue and actually remains present in some flowering plants after fertilization as a source of
nutrients for the embryo.
The Integuments
The integument is the tough outer protective layer of the ovule. In the diagrams below we can
see that gymnosperms, such as pine trees and spruce trees, usually have one integument in an
ovule, so we call them unitegmic. On the other hand, angiosperms, like maples and daisies,
typically have two integuments, and we call them bitegmic. The integument encloses the
nucellus except for a small gap, which is called the micropyle.
Types of Ovule:
1. Orthotropous (Atropous)-This is where the body of ovule is straight, so that the
micropyle lie on the same vertical axis with the funicle and chalaza, e.g. Polygonium.
2. Anatropous-In this type the body of the ovule becomes completely inverted, so that the
micropyle and hilum come to lie very close to each other. The hilum is a scar that marks the
point where the ovule remains attached to the funicle.The micropyle and chalaza lie on the
same vertical axis but not funicle, e.g., Helianthus, Castor.
Fig.4.13 Types of ovules: (A) Orthotropous, (B) Anatropous, (C) Campylotropous, (D) Ovule
with three integuments, (E) Hemi-anatropous, (F) Amphitropous, (G) Circinotropous
3. Campylotropous-When the micropylar end of the ovule is bend downwards hence the
micropyle and chalaza do not lie on the same straight line, it is called campylotropous, e.g.
Pea, Mustard.
4. Hemi-anatropous-In this type, the nucellus and integuments lie more or less at right
angles to the funicle. The micropyle and chalaza lie in one straight line e.g. Ranunculus.
5. Amphitropous-When the curvature of the ovule is so much pronounced that the embryo
sac bends like a horse-shoe, the ovule is called amphitropous, e.g. Poppy.
6. Circinotropous-In this type, the nucellar protuberance is at first in the same line as the
axis, but the rapid growth on one side makes it anatropous. The curvature continues till the
ovule has turned over completely with the micropylar end again pointing upward, e.g.
Opuntia.
Observations:
The following characters are observed.
1. Anatropous ovule is most common among angiosperms.
2. The ovule is a rounded structure attached to the placenta by a stalk, the funicle. The place
of attachment of funicle to the body of the ovule is known as hilum.
3. The basal region of the ovule, where from integuments arise, is known as chalaza.
4. In anatropous ovules, the funicle extends above, along the body of the ovule to form a
ridge, known as raphe.
5. The ovule consists of integuments, nucellus and embryo sac.
6. Integuments which may be one (unitegmic) or two (bitegmic) surround the nucellus. These
extend well beyond the nucellus to form a narrow opening called micropyle.
7. Nucellus lies below the integuments. If it is massive, ovules are called crassinucellate and
if scanty, these are called tenuinucellate. Unitegmic ovules are crassinucellate and bitegmic
ovules are tenuinucellate.
8. Enveloped by nucellus is the female gametophyte or embryo sac. A typical embryo sac
shows an egg apparatus consisting of an egg and two synergids towards micropyle. In the
centre are 2 polar nuclei and 3 antipodal are present at the chalazal end.
Fig.4.15 Comparing ovules, (A) L.S. of Orthotropous, straight ovule, (B) L.S. of curved
anatropous ovule
7. Another male gamete fuses with two polar nuclei or secondary nucleus to form a triploid
(3X) primary endosperm nucleus which later on develops into endosperm.
Fig. 4.17 Female gametophyte. A-F, Development of embryo sac of normal type (Polygonium
type)
Observations:
It shows following characters.
1. Heart-shaped embryo consists of a suspensor and a heart -shaped mass of cells.
2. The suspensor is a row of cells arranged in a single line.
3. The uppermost cell of suspensor lies closer to micropyle. It is swollen and is known as
vesicular cell.
4. The lowermost cell of suspensor lies close to the embryo proper. It is known as
hypophysis.
5. Heart-shaped embryo is formed as a result of cell divisions in globular embryo at places
where cotyledons develop.
6. Heart-shaped embryo is differentiated into outer dermatogen, middle periblem and
innermost plerome.
4.4 SUMMARY
The mounting of specimens on microscope slides is often critical for successful viewing. The
problem has been given much attention in the last two centuries and is a well-developed area
with many specialized and sometimes quite sophisticated techniques. In a dry mount, the
simplest kind of mounting, the object is merely placed on the slide. A cover slip may be
placed on top to protect the specimen and the microscope's objective and to keep the
specimen still and pressed flat. This mounting can be successfully used for viewing
specimens like pollen. In a wet mount, the specimen is placed in a drop of water or other
liquid held between the slide and the cover slip by surface tension. This method is commonly
used, for example, to view microscopic organisms that grow in pond water or other liquid
media, especially when studying their movement and behavior. The mounting medium is the
solution in which the specimen is embedded, generally under a cover glass. Simple liquids
like water or glycerol can be considered mounting media, though the term generally refers to
compounds that harden into a permanent mount.
The pollen grain of flowering plants is a haploid, uninucleate cell having two
layers, the outer layer exine and inner layer exine. Permanent slides of pollen grains can be
used as a reference for identifying unknown pollen samples. It is therefore important, that the
pollen grains remain in an authentic, natural shape. The pollen grains do not remain united at
maturity, and are dissociated into single pollen grain called monad. Sometimes rarer types
like dyads, Octads and Polyads also occur. The pollen grain is uninucleate in the beginning.
At the time of liberation, it becomes 2 celled, with a small generative cell and a vegetative
cell. In the nutrient medium, the pollen grain germinates. The tube cell enlarges and comes
out of the pollen grain through one of the germ pores to form a pollen tube. The tube nucleus
descends to the tip of the pollen tube. The generative cell also passes into it. It soon divides
into two male gametes.
Mature ovule contains an embryo sac also known as female gametophyte. Female gamete
(egg) fuses with male gamete to form zygote which later on develops into embryo.
4.5 GLOSSARY
4. Phenomenon of the formation of more than one embryo per ovule is called____________
5. A small pore in the ovule through which the pollen tube enters is called__________
6. Inside ovary, ovule develop from a special tissue called_______________
7. For staining material___________ solution is commonly used.
8. Canada balsam is a resin obtained from a conifer____________
9. Semi-permanent and temporary preparations are mounted in _____________
10. Pollen grains have hard coat made of _______________
11. The outer and inner layer of pollen are__________ and___________
12. Intine of pollen grains is composed of_________ and____________
4. How many male cells are there in the pollen tube of angiosperm
(a) One (b) Two
(c) Three (d) Four
5. Type of placenta in which ovary is syncarpous unilocular and ovules on sutures is called
(a) Apical placentation (b) Parietal placentation
(c) Marginal placentation (d) Superficial placentation
13. The ovule develop over the entire inner surface of the carpels
(a) Basal (b) Free-central
(c) Marginal (d) Superficial
4.7 REFERENCES
http://www.readorrefer.in
5.1 OBJECTIVES
5.2 INTRODUCTION
The practical knowledge develops the scientific outlook of the subject and while working in
the laboratory a rational approach develops in the students. Here a clear cut differentiation
develops in the mind of the student regarding the theory of the subject. As in all experimental
sciences, research in plant anatomy depends on the laboratory methods that can be used to
study cell structure and function. Many important advances in understanding cells have
directly followed the development of new methods that have opened novel avenues of
investigation. The basic method used in plant anatomy, or the study of internal plant
structure, is the preparation of thin slices which are studied microscopically. From this the
science ―derives its name (in Greek, anatome means ―dissection‖). The emergence of the
field of plant anatomy is closely related to the invention and perfection of the microscope.
The English physicist R. Hooke observed in 1665 the cellular structure of thin slices of cork,
elder pith, and wood from various plants, using a microscope of his own improved design.
The objectives of undertaking practical studies in botany are to:
develop practical skill for better understanding through firsthand experience;
demonstrate the principles covered in the theory;
develop observational skill in the form of identifying and locating desired parts in
specimen;
develop manipulative skills in arranging and handling the apparatus and instruments
collect material and to mount it and to develop skill in preserving biological material and
specimens;
draw, label and record experimental results and interpret them.
Through practical work, not only the theoretical concepts are tested but also it trains you in
the scientific method.
Set the microscope at least 5 inches from the edge of the table to avoid its knocking off
accidently.
Always clean the lenses and mirror of the microscope with the lens paper/ cloth.
Otherwise there might be scratches on them.
Adjust the mirror by slightly tilting it and by seeing through the eye piece so that sufficient
light enters the microscope when you view under low magnification objectives.
Place the prepared slide directly over the hole in the stage.
Secure the slide on the stage with the stage clips to prevent accidental movement of the
slide.
Look through the eye piece and slowly bring the low magnification objective towards the
material by using the coarse adjustment until the specimen comes into view.
To change to high power, rotate the nose-piece to bring the high power objective in
position (taking precaution that the body tube does not move up or down).
Look through the eye piece, if the light is insufficient, open out the diaphragm slightly.
Gently raise the objective by using fine adjustment. If the image worsens without
improving, start lowering the objective by the same fine adjustment.
Do not use coarse adjustment while viewing under high power. By gently moving up and
down you will be able to get a clear focus.
While removing the slide from the stage release the spring clips. Do not allow the stage
clips to extend out of the stage.
When work gets over, rotate nose piece such that the objective lens is not over the hole in
the stage.
When not in use keep it covered by a polythene cover and/or lock it in its box.
(2) A simple hand lens: Contains a single double convex lens mounted on a handle. Can
magnify things four to five times and used for smaller magnification.
(3) Scalpel: Works like a knife, used to cut out thin slices and peel.
(5) A pair of forceps: Used for picking up very thin slices or material.
(6) Fine needles: Used for (i) adjusting sample/teasing any biological material on a glass
slide without touching it, placing the cover slip on the slide.
(7) Fine hair brush: Mainly used for transferring material for mounting on the slides.
(9) Glassware:
(i) A dropper: Used for putting a drop of liquid on the slide.
(ii)Plain glass slides: Used for preparing temporary or permanent mounts.
(iii) Cover slips (Very thin glass cover): Used for covering the material placed on glass
slide to be observed under the microscope. This protects the objective lens.
(iv) Petridish: Is a shallow dish often with a cover. Used for soaking specimen for the
purpose of preservation, staining etc. Also used to keep a medium on which bacteria or small
organisms may be cultured.
(v) Beaker: Available in various sizes from 100 ml to 1000ml. Used for preparing and
storing chemicals and performing experiments.
(vi) Flask: A bottle with a narrow neck used in the laboratory for performing experiments
(keeping solution, for heating solution etc).
(vii) Funnel: Available in various sizes i.e. in different diameter of the mouth of the funnel.
Used during filtration of solutions.
(viii) Pipette: A slender graduated glass tube for measuring and transferring known volume
of liquid.
(ix) Spirit lamp or Bunsen burner: Used for heating. It should be extinguished immediately
after use.
5.3.1-Plant anatomy
Plant anatomy is a basic core subject in the study of Botany. The cells of plants are quite
minute and microscopic in size, so cannot be observed by naked eyes. Such objects are
visible only under microscopes. Our eye has limited magnification or resolution power so
unable to distinguish the objects smaller than 0.1 mm. Moreover the living cells are
transparent in ordinary light and cannot be distinguished among various cellular components.
The microscopes are the most important tools in the plant anatomy and their magnification
power is achieved by lenses of various types.
Solid material should be sectioned in several planes in order to discover the distribution of
the various tissues within it. The complete investigation of axial structures, such as stem or
root, normally requires a transverse (cross) section at one or more levels and radial
longitudinal, and tangential longitudinal sections at different depths from the surface to the
center. Foliar structures generally require transverse and vertical longitudinal sections may
occasionally be necessary. Hand sections of plant organs can be obtained readily and this,
together with the use of simple staining schedules, allows the visualization of the structure
using a light microscope. The exercise can be performed by students at all levels after having
demonstrated the techniques to them. Students will need help initially in identifying cell and
tissue types. Color photographs will be useful to serve as a guide for identification purposes.
Some of the techniques are given below.
5.3.2-Section cutting
Free Hand Sectioning Methods
Most plant parts are too thick to be mounted intact and viewed with a microscope. In order to
study the structural organization of the plant body, sections have to be made so that enough
light can be transmitted through the specimen to resolve cell structures under the microscope.
A free hand section is the simplest method of preparing specimens for microscopic viewing.
This method allows one to examine the specimen in a few minutes. It is also suitable for a
variety of plant materials, such as soft herbaceous stems and small woody twigs. The fixation
of materials is generally not required for temporary preparations.
In order to reveal the cellular organisation, the plant material is usually cut into following
types of sections:
1. Cross Section: Here the section is cut at the right angle to the plant material and it is
of two type:
a) Transverse section: Section at right angle to vertical axis of the material such as in
root and stem as in figure given below.
b) Vertical Section: Section at right angle to the transverse axis such as in leaves and
thallus.
2. Longitudinal Section: The section is cut at right angle to the transverse axis and is also of
two types:
a) Radial Longitudinal Section (RLS): In this the section is cut through the radius
b) Tangential Longitudinal Section (TLS): In this the section is cut through the tangent and
do not pass through the central part.
Note: For cross sections, special care should be taken during sectioning to see that the
material is not cut obliquely. In our experience, as long as the sections are not obliquely
sectioned, even "thick" sections are usable. During sectioning, a number of sections should be
cut at the same time and one should not worry about the section thickness at this time. By
slightly and progressively increasing the pressure with the razor blade on the first finger, and
simultaneously exerting increasing pressure onto the specimen by the thumb, a number of
sections can be cut without moving the material or the thumb.
For delicate and hard to hold specimens such as thin leaves and tiny roots, additional support
can be used to facilitate hand sectioning. The following methods will allow for the sectioning
of thin leaves and small, soft specimens such as roots. Tissue pieces can be inserted into a
small piece of pith such as a carrot root. Once the tissue is firmly in place, the hand
sectioning technique can be applied.Longitudinal sections are also difficult to obtain by hand
without supporting material as small stem and root pieces are difficult to hold with one's
finger. However, by cutting a v-shaped notch into the pith support, it is possible to hold the
tissue firmly for free hand sections.
in each ethanol grade is done. After finishing the dehydration you need to make a transition
of ethanol to resin (3:1, 1:1, 1:3,) the time for each step is variable depending upon the size of
your sample. After this we can mount the section in Canada balsam or DPX and cover it with
cover slip.
For permanent preparations: Canada balsam and DPX mountant are used for permanent
slide as mounting media.
Mounting is done at the center of the slide. For this put a drop of mounting media at the
center of the slide and the material is transferred in the drop of medium with help of a brush.
With the help of a needle we put cover slip over it gently in such a way that air bubble should
not be there. Extra amount of fluid can be removed by blotting paper.
Maceration Technique
A maceration method has been very useful in studying the features of intact cells. In this
maceration procedure, the middle lamella, which normally cements adjacent cells together, is
dissolved by acid which allows the cells to separate from one another.
Maceration fluid preparation: The maceration fluid is prepared by combining 1 part of a 30%
solution of hydrogen peroxide, 4 parts of distilled water, and 5 parts of glacial acetic acid. Be
sure to use a clean bottle and prepare this solution in the fume hood. Avoid contact with the
solution, wear gloves if necessary.
5. If necessary, transfer a small mass of cells into a vial containing water; otherwise simply
process the tissue using the original vial. Be sure to cap the vial tightly, and shake
vigorously until the water becomes clouded with cells.
6. Apply a small drop of the mixture to a glass slide, cover it with a cover glass and
examine.
Mounting media: Glycerine 10% for temporary preparations and Canada balsam or D.P.X.
Mountant for permanent preparations
Crystal violet:
• Crystal violet: 3 g
• Distilled water: 80 ml
• Ethyl alcohol (95%): 20 ml, dissolved and mixed with 0.8 g of ammonium oxalate.
It is a violet dye and is used to stain the lignified tissues.
The color of stain by gentian violet depends on the acidity. At pH 1.0, the dye is green, but in
an alkaline solution it is colorless.
Methylene blue:
• Methylene blue: 0.3 g
• (0.01%) distilled water - 100 ml
• Ethyl alcohol (95%): 30 ml, dissolved and mixed with potassium hydroxide
It is used to stain cellulose walls.
Safranin:
• Safranin: 0.25 g
• Alcohol (95%): 10 ml
• Distilled water: 100 ml
This is mainly used to stain lignified tissues.
Fast Green:
• Fast Green: 0.5 g
• Alcohol (95%): 100c.c.
Fast green is the green dye used to stain thin walled tissue.
Common Biological Stains: Different stains react or concentrate in different parts of a cell
or tissue, and these properties are used to advantage to reveal specific parts or areas. Some of
the most common biological stains are listed below. Unless otherwise marked, all of these
dyes may be used with fixed cells and tissues; vital dyes (suitable for use with living
organisms) are noted.
Carmine: Carmine is an intensely red dye used to stain glycogen, while Carmine alum is a
nuclear stain. Carmine stains require the use of a mordant, usually aluminum.
Crystal violet: Crystal violet, when combined with a suitable mordant, stains cell walls
purple. Crystal violet is the stain used in Gram staining. Crystal violet stains the acidic
components of the neuronal cytoplasm a violet colour, specifically nissl bodies.
Eosin: Eosin is most often used as a counter stain to haematoxylene, imparting a pink or red
colour to cytoplasmic material, cell membranes, and some extracellular structures. It also
imparts a strong red colour to red blood cells. Eosin is a red dye that stains cytoplasm. It is
water-soluble and thus can be used to follow water movement through plants.
Acid fuchsine: Acid fuchsine may be used to stain collagen, smooth muscle, or
mitochondria. Acid fuchsine is used as the nuclear and cytoplasmic stain. Acid fuchsine is
also a traditional stain for mitochondria. The dye fuchsine is a biological stain that is
produced by oxidation of a mixture of aniline and toluidine, producing a brilliant bluish red.
Iodine: Iodine is used in chemistry as an indicator for starch. When starch is mixed with
iodine in solution, an intensely dark blue colour develops, representing a starch/iodine
complex. Starch is a substance common to most plant cells and so a weak iodine solution will
stain starch present in the cells. Iodine is one component in the staining technique known as
Gram staining, used in microbiology.
Methyl green: Methyl green is used commonly with bright-field microscopes to dye the
chromatin of cells so that they are more easily viewed.
Methylene blue: Methylene blue is used to stain animal cells, such as human cheek cells, to
make their nuclei more observable. Also used to stain the blood film and used in cytology.
Safranin: Safranin (or Safranin O) is a nuclear stain. It produces red nuclei, and is used
primarily as a counter stain. Safranin may also be used to give a yellow colour to collagen.
Leaf Anatomy
T.S. Leaf: Leaf comprises following cells or tissue:
Epidermal layer-barrel shaped cells on the dorsal and ventral surfaces.
Palisade mesophyll – tightly packed cells that absorb light
Spongy mesophyll – loosely packed cells with air spaces
Stomata – pore-like openings for taking in CO2 and releasing O2
Leaves are of two types; dorsiventral common in Dicots and isobilateral common in
Monocots. These are clearly distinguished on the basis of their venation, mesophyll cells, and
distribution of stomata and even on the basis of their colour.
I. Epidermis:
The upper epidermis is multiseriate, being made of a few layers of cells. Lithocysts are
frequently present and well-developed calcium carbonate crystals, the cystoliths, occur here
and there. The lower epidermis is uniseriate. The outer layer of upper epidermis and the
lower epidermis as a whole are made of compactly-arranged tubular cells with cutinised outer
walls having cuticle. The degree of cutinisation is more pronounced on the upper side.
Stomata occur on the lower epidermis.
II. Mesophyll:
It is differentiated into palisade and spongy cells. Two or three layers of columnar cells with
abundant chloroplasts remain arranged more or less at right angles to the upper epidermis.
These are palisade cells. This is the principal photosynthetic tissue. The spongy cells
occurring towards lower epidermis are isodiametric, and often irregular in shape, and have
profuse intercellular spaces. The number of chloroplasts is naturally much smaller here in
comparison to palisade cells.
I. Epidermis:
Both upper and lower epidermal layers are uniseriate and composed of more or less oval cells
with cuticularised outer walls. Upper epidermis may be easily identified due to presence of
large and empty bulliform cells. Stomata occur on both the epidermal layers.
II. Mesophyll:
The mesophyll does not show differentiation into palisade and spongy cells, but is made of
rather compactly-arranged isodiametric cells.
I. Epidermis:
Epidermal layers are uniseriate both on the adaxial and abaxial sides. They are composed of
closely-set cells. Stomata occur on the upper side. Moreover, there is deposition of waxy
matters which prevents wetting and clogging of the stomata.
II. Mesophyll:
It is differentiated into palisade and spongy cells. A few layers of columnar cells occur
towards the adaxial side forming the palisade. The spongy cells present towards lower
epidermis and irregular in outline. Large air chambers are present in the mesophyll.
Elongated sclerotic cells—the trichosclereids commonly called ‗internal hairs‘, often with
branched ends are frequently present.
These are very much reduced. As usual they are composed of xylem and phloem, and remain
surrounded by parenchymatous bundle sheath.
Stem Anatomy
The stem and other plant organs are primarily made from three simple cell types:
parenchyma, collenchyma, and sclerenchyma cells. Parenchyma cells are the most common
plant cells. They are found in the stem, the root, the inside of the leaf, and the pulp of the
fruit. Parenchyma cells are responsible for metabolic functions, such as photosynthesis. They
also help repair and heal wounds. In addition, some parenchyma cells store starch.
Collenchyma cells are elongated cells with unevenly-thickened walls. They provide structural
support, mainly to the stem and leaves. These cells are alive at maturity and are usually found
below the epidermis.
Dicot stems
Dicot stems with primary growth have pith in the center.
Vascular bundles forming a distinct ring visible when the stem is viewed in cross section.
The outside of the stem is covered with an epidermis, which is covered by a waterproof
cuticle.
The epidermis may also contain stomata for gas exchange and multicellular stem hairs
called trichomes.
Cortex comprises the cells of collenchyma, and parenchyma.
A cortex is flanked by hypodermis (collenchyma cells) outside and endodermis (starch
containing cells) inside.
Collenchyma cells lie under the epidermis and constitute three to four layers of cells
with cell walls thickened at the corners. The collenchyma cells contain chloroplasts.
The parenchyma cells make up the bulk of the cortex. They synthesized organic food
(mainly starch) is stored here. The intercellular air spaces are responsible for gaseous
exchange.
Endodermis is starch sheath which forms the innermost layer of the cortex.
This is a single layer of tightly-packed rectangular cells bordering the stele of the stem.
The cells of this tissue store starch. It allows solutions to pass from the vascular bundles
to the cortex.
The vascular cambium cells divide to produce secondary xylem to the inside and
secondary phloem to the outside.
As the stem increases in diameter due to production of secondary xylem and secondary
phloem, the cortex and epidermis are eventually destroyed.
Before the cortex is destroyed, a cork cambium develops there. The cork cambium
divides to produce waterproof cork cells externally and phelloderm cells internally.
These three tissues form the periderm, which replaces the epidermis in function. Areas of
loosely packed cells in the periderm that function in gas exchange are called lenticels.
Monocot stems
Vascular bundles are present throughout the monocot stem, although concentrated
towards the outside and not in a ring as found in dicots.
The shoot apex in monocot stems is more elongated.
Monocots rarely produce secondary growth and are therefore seldom woody, with Palms
and Bamboo being notable exceptions.
However, many monocot stems increase in diameter via anomalous secondary growth
occur.
Monocot stems, such as corn, palms and bamboos, do not have a vascular cambium and
do not exhibit secondary growth by the production of concentric annual rings.
They have scattered vascular bundles composed of xylem and phloem tissue.
Each bundle is surrounded by a ring of cells called a bundle sheath.
The structural strength and hardness of woody monocots is due to clusters of heavily
lignified tracheids and fibers associated with the vascular bundles.
The following illustrations and photos show scattered vascular bundles in the stem cross
sections of corn (Zea mays):
Root Anatomy
In vascular plants, the root is the organ of a plant that typically lies below the surface of the
soil. Roots can also be aerial or aerating, that is growing up above the ground or especially
above water. The root is best defined as the non-leaf, non-node bearing parts of the plant's
body. However, important internal structural differences between stems and roots exist.
When dissected, the arrangement of the cells in a root is root hair, epidermis (epiblema),
cortex, endodermis, pericycle and, lastly, the vascular tissue in the centre of a root to
transport the water absorbed by the root to other places of the plant.
1. Epiblema is the outermost single layer made from compactly arranged parenchymatous
cells without intercellular space. Usually Epiblema has no stomata but bears unicellular
epidermal root hairs and less amount of cutin. It contains more cuticle than dicot roots.
The root hairs and thin walled epidermal cells take part in the absorption of water and
minerals from the soil. The epiphytes have several layered hygroscopic epidermis, called
velamen tissues. It is made from spongy dead cells which help in absorption of water
from atmosphere.
2. Cortex is a multi-layered well developed and made from oval parenchymatous cells with
intercellular spaces. The intercellular spaces usually help in gaseous exchanges, storage
of starch, etc. Cortex helps in mechanical support to the roots (like hypodermis to stem).
3. Endodermis is innermost layer of cortex made from barrel shaped parenchyma. It forms
a definite ring around the stele. These cells are characterized by the presence of casparian
strips. It is deposition of suberin and lignin, on their radial and tangential walls. Usually
passage cells are absent in monocot roots. Due to presence of casparian strips,
endodermis forms water tight jacket around the vascular tissues, hence it is also called
biological barrier.
4. Pericycle is uniseriate (multiseriate in Smilax) and made from thin walled
parenchymatous cells. It is outermost layer of stellar system. Usually it is made from
parenchymatous cells but it may become sclerenchymatous in older roots. Several lateral
roots arise from this layer.
5. Vascular bundle is radial, arranged in a ring (except mangrove, which also contains
lenticels), polyarch (presence of many alternating xylem and phloem bundles). Xylem
and phloem are found at different radii alternating with each other (radial). The number of
xylem and phloem vary from, 8 to 46 (100 in pandanus). The xylem is exarch, i.e. the
protoxylem lies towards periphery and metaxylem toward center.
The phloem is also exarch (protophloem towards the periphery and metaphloem towards the
center). Secondary growth is absent in monocot roots due to lack of vascular and cork
cambium. Conjunctive tissue is parenchymatous tissues which separates xylem and phloem
bundles.
6. Pith is large, well developed portion of monocot root. It occupies the central portion and
made from thin walled parenchymatous tissue with intercellular spaces. It contains
abundant amount of starch grains.
1. Epiblema or Epidermis - It is the outermost unilayered with several unicellular root hairs.
It consists of thin walled, compactly arranged living parenchymatous cells. Usually epiblema
is characterised by absence of stomata and cuticle.
3. Endodermis - It is the innermost layer of cortex and covers the stele. It consists of
compactly arranged barrel shaped parenchyma without intercellular spaces. Most of the cells
are characterised by the presence of special thickening of suberin and lignin on their radial
and tangential walls called casparian strips. Some endodermal cell near protoxylem has no
casparian strips and called passage cells or transfusion cells. These cells allow radial
diffusion of water and minerals through the endodermis.
5. Vascular bundles - They are 2-8 in number, radial and arranged in ring. Xylem and
phloem bundles are separated from each other by parenchymatous cells called conjuctive or
complementary tissue.
Xylem is exarch (i.e. protoxylem towards the periphery and metaxylem towards the
centre) and consists of tracheids, vessels, xylem parenchyma and xylem fibres.
The phloem forms oval masses beneath the pericycle, alternating with xylem bundles.
Phloem consists of sieve tubes, companion cells and phloem parenchyma. Usually
phloem fibers are absent or reduced.
6. Pith - it is feebly developed and centrally located. It consists of thin walled, polygonal
parenchyma cells with intercellular spaces. In dicots roots, it may be reduced or absent. It
helps in storage of food materials.
5.4 SUMMARY
The unit comprising different practical tools, sectioning procedure, process of staining the
section. Microscopes are important tools for observation due to immense resolution power
and the magnification of the microscope is determined by multiplying the magnification of
the eyepiece by the magnification of the objective lens. In order to reveal the cellular
structure, plant materials are being cut in various planes. Normally cross and longitudinal
sections are taken for the study. These sections are stained through chemical stains and then
after mounting we put them under microscope for the study. Unit has detailed idea regarding
all the glasswares and the sectioning procedure along with staining. Root, stem and leaves
anatomical features have been described in detail with the differentiating features between
dicot and monocot plants.
5.5 GLOSSARY
Cuticle - The waxy, water-repelling layer on the outer surface of a leaf that protects it from
dying out.
Epidermis - The protective, outer layer of cells on the surface of a leaf. The guard cells (and
stoma) are part of the epidermis.
Guard Cell - One of a pair of sausage-shaped cells that surround a stoma (a pore in a leaf).
Lamina - The blade of a leaf.
Mesophyll - The chlorophyll-containing leaf tissue located between the upper and lower
epidermis. These cells convert sunlight into usable chemical energy for the plant.
Palisade Mesophyll - A layer of elongated cells located under the upper epidermis. These
cells contain most of the leaf's chlorophyll, converting sunlight into usable chemical energy
for the plant.
Sclerenchyma- Tissue composed of thick-walled cells containing lignin for strength and
support.
Spongy mesophyll - The layer below the palisade mesophyll; it has irregularly-shaped cells
with many air spaces between the cells. These cells contain some chlorophyll. The spongy
mesophyll cells communicate with the guard cells (stomata), causing them to open or close,
depending on the concentration of gases.
Stoma - (plural stomata) a pore (or opening) in a plant's leaves where water vapor and other
gases leave and enter the plant. Stomata are formed by two guard cells that regulate the
opening and closing of the pore. Generally, many more stomata are on the bottom of a leaf
than on the top.
(ii) A parenchymatous sheet of tissues separates the phloem strands from xylem and it
becomes:
(a) Pericycle (b) Endodermis
(c) Stele (d) Cambium
5.7 REFERENCES
Esau K. 1977, Plant anatomy. New York: John Wiley & Son.
Fahn, A. 1990, Plant Anatomy, Pergamon Press, Oxford 4th Edn.
Pandey,B. P., 2001, Plant Anatomy, Published by S. Chand Publisher.
Pandey, S.N., 1997, Plant Anatomy and Embryology, Pub. Vikas Publication House Pvt
Ltd.
Singh, V., 2010, Plant Anatomy and Embryology of Angiosperms, Global Media
Publications.
Vasishta, P.C. 1968, Plant Anatomy, Pradeep Publication & Co Chandigarh.
6.1 OBJECTIVES
6.2 INTRODUCTION
In botany, secondary growth is the growth that results from cell division in the cambia or
lateral meristems and that causes the stems and roots to thicken, while primary growth is
growth that occurs as a result of cell division at the tips of stems and roots, causing them to
elongate, and gives rise to primary tissue. Secondary growth occurs in most seed plants, but
monocots usually lack secondary growth. If they do have secondary growth, it differs from
the typical pattern of other seed plants.
In many vascular plants, secondary growth is the result of the activity of the two lateral
meristems, the cork cambium and vascular cambium. Arising from lateral meristems,
secondary growth increases the girth of the plant root or stem, rather than its length. As long
as the lateral meristems continue to produce new cells, the stem or root will continue to grow
in diameter. In woody plants, this process produces wood, and shapes the plant into a tree
with a thickened trunk.
Because this growth usually ruptures the epidermis of the stem or roots, plants with
secondary growth usually also develop a cork cambium. The cork cambium gives rise to
thickened cork cells to protect the surface of the plant and reduce water loss. If this continues
for many years, this may produce a layer of cork. In case of oak it will yield harvestable cork.
Anomalous secondary growth refers to the deviation of the secondary growth from the
normal type of growth. It is also known as abnormal or more appropriately unusual secondary
growth, as the term encompasses some less common type of secondary growth patterns.
Though secondary growth is an exclusive feature of dicotyledonous plants, but there are some
monocotyledons that also show secondary growth.
dedifferentiation in some of the parenchyma cells of the medullary rays which are at the level
of cambium cells and adjoining the vascular cambium. As a result, these cells now become
meristematic and represent the inter-fascicular cambium. The meristematic cells of the intra-
fascicular cambium and inter-fascicular cambium join and result in the formation of a
continuous strip of meristem called cambium ring. The cambium ring at this stage has
primary xylem on its inner surface and primary phloem on its outer surface.
The cambium ring exhibits mitotic activity on both the sides. The mitotic activity on the inner
surface results in the formation of cells, which differentiate into xylem. It represents the
secondary xylem. Similarly, the mitotic activity on the outer surface results in the formation
of cells, which differentiate into phloem. It represents the secondary phloem. Due to the
formation of secondary xylem, the primary xylem becomes pushed more towards the pith and
the pith gets slightly reduced. However, the secondary phloem grows and completely masks
the primary phloem. Hence, it is not visible.
The mitotic activity of the cambial ring is purely seasonal. It occurs only twice during every
year, once in the spring and once in the autumn season. Thus, every year two sets of
secondary xylem and two sets of secondary phloem are formed. Each year, the mitotic
division of the cambial ring usually begins in the spring season. The secondary xylem that is
formed in the spring season is therefore known as springwood or early wood, while the
secondary xylem formed in the autumn is known as autumn wood or late wood. The
springwood is generally characterized by the presence of xylem vessels having wider lumen.
This is because, spring is the ideal season for growth and the water requirement of the plant is
more in the spring. The autumn wood has xylem vessels with narrow lumen, since water
requirement in the winter is less.
As long as the lateral meristems continue to produce new cells, the stem or root will
continue to grow in diameter.
In woody plants, this process produces wood, and shapes the plant into a tree with a
thickened trunk.
This growth usually ruptures the epidermis of the stem or roots, plants with secondary
growth usually also develop a cork cambium.
For this any outer layer of cortex becomes meristematic and begins to divide. This is
known as Phellogen or cork cambium.
The cork cambium gives rise to thickened cork cells to protect the surface of the plant
and reduce water loss.
Phellogen or cork cambium divides to produce outer cork (Phellem) and
inner secondary cortex (phelloderm).
All the three tissues phellem, phellogen and phelloderm are together known as
periderm.
The vascular cambium normally lies in between primary xylem and primary phloem. But
sometimes, in plants such as Thinouia sp., Serjania sp., Paullinia sp., Bauhinia
langsdorffiana, etc. cambium may be present elsewhere and its location may not be well
differentiated. Cambium in such unusual position shows unusual activity resulting in
anomalous secondary structure.
layers and afterwards forming secondary phloem. It forms a complete ring of vascular
bundles and then it stops functioning. A new ring of cambium called accessory cambium is
formed from the parenchyma cut off externally by the earlier cambium. This newly formed
cambium also behaves unusually in a similar manner forming another ring of vascular
bundles embedded in parenchyma and then becomes inactive. Likewise, more accessory
cambia are formed giving rise to successive rings of vascular bundles.
Epidermis
Single layered epidermis consists of small, radially elongated cells.
Multicellular epidermal hairs arise from some cells.
A thick cuticle is present on the epidermis.
Some stomata are also present.
Cortex
It is well differentiated and consists of few layered collenchymatous hypodermis
followed by chlorenchyma.
Collenchyma is 3 to 4 cells deep, but generally near stomata it is only one layered.
Chlorenchyma is present inner to collenchyma in the form of 3 to 7 layers.
Chlorenchymatous cells are thin walled, oval, full of chloroplasts and enclose many
intercellular spaces.
Endodermis is clearly developed and made up of many, tubular, thick-walled cells.
Pericycle
Inner to the endodermis is present parenchymatous pericycle but at some places it is
represented by isolated patches of sclerenchyma.
Vascular System
Vascular bundles are present in three rings. In the innermost ring are present two large
bundles; in the middle ring the number ranges from 6 to 14 while the outermost ring
consists of 15 to 20 vascular bundles.
The cambium of the outermost ring of the vascular bundles forms a complete ring at the
time of secondary growth by the union of inter- and intrafascicular cambium.
The intrafascicular cambium forms secondary xylem on the inside and secondary phloem
on the outside, whereas the interfascicular cambium forms conjunctive tissue on the
inside and parenchymatous tissue on the outside.
The interfascicular cambium functions for some time, and then it ceases its activity.
Soon after, a new accessory cambium ring arises by the union of the secondary
parenchyma cells lying above and the cells of pericycle positioned outside the phloem.
This first accessory cambium ring behaves in a similar manner as of the vascular
cambium, forming secondary xylem alternating with conjunctive tissue on the inner side
and secondary phloem above parenchyma tissue on the outside.
As a result, another ring of vascular bundles is formed which are of secondary origin.
This process may be repeated to form four or more successive rings of vascular bundle.
The phloem is described as being included phloem, which by definition is phloem tissue
which lies between regions of secondary xylem.
The anomalous growth results as a result of differential cambial activity. Newly-
produced vascular cambia result in the outer lateral meristem becoming quiescent and this
cambium returns to activity only when the internal vascular cambium becomes less
active.
Vascular cambia do not produce rays in Nyctaginaceae but do produce vessels, axial
parenchyma and sometimes fibers to the inside and variable secondary phloem to the
outside.
6.3.3-Nyctanthes (Family–Oleaceae)
The outline of T.S. appears quadrangular and reveals the following tissues from outside with-
in:
Epidermis
Single-layered epidermis consists of rectangular cells.
A thick uninterrupted cuticle is present on the epidermis.
Many multicellular hairs are present.
Cortex
It is differentiated into collenchyma and parenchyma.
Collenchyma is several cells deep below the four protruded comers while only few layers
deep at the other places just beneath the epidermis.
Parenchyma is present below the collenchyma. Many intercellular spaces are present. The
region extends up to the vascular tissue.
Cortical bundles
Four vascular bundles are present in the cortex, situated one in each protruded bulge.
Each conical bundle faces its pointed xylem end towards outer side, i.e., epidermis, and is
conjoint, collateral, open and exarch.
These bundles may show secondary growth at maturity.
Endodermis
Not well-developed.
Pericycle
It is in the form of sclerenchymatous patches.
Vascular System
It consists of primary phloem, secondary phloem, cambium, secondary xylem and
primary xylem.
Primary phloem is crushed and irregularly present in patches below pericycle.
Secondary phloem is present in the form of a continuous ring and consists of sieve tubes,
companion cells and phloem parenchyma
Cambium is one to three cells thick continuous layer present in between phloem and
xylem.
Secondary xylem is present just inner to the cambial ring and consists mainly of thick
walled wood parenchyma and fibres. Tracheids and vessels are also present
Primary xylem is situated just near the pith facing its protoxylem towards the centre.
Pith
It is thin walled and parenchymatous.
Abnormality
Abnormality in Nyctanthes is the presence of cortical bundles, which are inversely
oriented, 4 in number and never directly connected with the main axial ring of the
vascular cylinder. These are leaf trace bundles.
Cortical bundles have also been reported in some other families such as Casuarinaceae
(Casuarina), Umbelliferae (Eryngium), Papilionaccae (Latkyrusmarytimus).
Mclastomaccac, Rutaccae, etc.
Pith
It is well developed, thin-walled, parenchymatous and present at the center.
Dracaena (the Dragon's blood tree) is the only monocot which have secondary growth in
roots. Dracaena is a monocot. The stems undergo a specialized secondary growth, which
manifests itself in the production of additional parenchymatous elements. Their later growth
pattern is termed diffuse secondary growth, and consists mostly of a proliferation of ground
parenchyma cells and additional vascular bundles near the periphery.
Young stem has a typical monocot structure having single epidermis, sclerenchymatous
hypodermis and numerous closed, collateral vascular bundles scattered in the
parenchymatous ground tissue.
In Dracaena secondary growth is due to:
A) Extrastelar cambium ring in monocot stem at the cortex
B) Abnormal activity of the cambium
Fig. 6.12 T.S. Dracaena Stem Showing Special Type of Secondary Growth
Epidermis
It consists of single layer of barrel shaped cells covered externally by thick cuticle.
Lateral and inner walls are thin.
Cortex
It is well differentiated into collenchyma and chlorenchyma.
Collenchyma is present just below the epidermis. It is more prominent below ridges.
Comers of the cells are thick and the cells are-oval or polygonal in shape.
Chlorenchyma is present inner to collenchyma. Thin walled cells are spherical to oval in
shape, filled with chloroplasts and contain many intercellular spaces.
Endodermis is poorly developed and sometimes absent. The cells are elongated and lack
casparian strips.
Pericycle
It consists of few layers of thin walled, compactly arranged cells. It becomes
sclerenchymatous in older stems.
Vascular System
The normal ring of vascular bundles is absent. Instead there are two rings of medullary
bundles formed by the activity of accessory cambia.
The first accessory cambium differentiates in the pericycle. It behaves unusually by first
forming small amount of parenchyma on the outside, and then cutting xylem alternating
with parenchyma on the inner side and consequently forming phloem alternating with
parenchyma on the outside.
As a result, a ring of conjoint, collateral, endarch and open type of vascular bundles is
formed which gets embedded in parenchymatous tissue.
After sometime, this cambium ceases to function and becomes passive. A second
accessory cambium arises from the parenchyma cut off by the previous one on the
outside.
It also behaves in a similar fashion producing a second ring of vascular bundles again
included in the parenchyma, but alternating to the first one.
Similarly, numerous accessory cambia develop consecutively producing consecutive
rings of vascular bundles, giving a scattered appearance in the ground tissue of the stem.
The final accessory cambium ring forms sclerenchyma alternating with xylem internally
thus the last ring of vascular bundles seems to be embedded in sclerenchyma.
On maturity, sometimes the medullary bundles along with some adjoining parenchyma
may degenerate creating cavity.
Primary phloem is crushed and present in patches.
Secondary phloem is present in the form of a complete ring which consists of sieve
tubes, companion cells and phloem parenchyma.
Cambium is distinct and present in one to many layers located in between phloem and
xylem.
Secondary xylem remains embedded in conjunctive tissue and consists of proto-and
metaxylem vessels and abundant parenchyma.
Conjunctive tissue is present in abundance and consists of thick walled and lignified
cells.
Primary xylem is present near the pith facing its protoxylem towards centre.
Though the normal vascular cambium is not formed but the cork cambium is formed and
functions normally.
Medullary Bundles
Many scattered medullary bundles are present in the pith.
Each medullary bundle is conjoint, collateral and endarch, with the cambium either feebly
developed or functionless or absent.
Pith
It is parenchymatous and cells show some intercellular spaces.
Fig.6.13. Stem of Amaranthus Showing Secondary Growth (A) T.S. Stem (Diagrammatic)
(B) Magnified View of Stem T.S.
In the pericycle region the outer primary bundles become meristematic and develop few
layered cambium. This cambium cuts collateral vascular bundles towards inner side
consisting of secondary phloem and secondary xylem. Cambium also cuts many layered
parenchymatous conjunctive tissue which becomes lignified and thick walled. The vascular
bundle lies completely embedded in conjunctive tissue.
b) Storage roots - Many plants have storage roots where the reserve food material is stored
in the parenchymatous tissue. A considerable amount of storage parenchymatous tissue is
formed as a result of anomalous secondary growth in them which is considered to be an
adaptation to their storage function, e.g. Beta vulgaris, Raphanus sativus, Ipomoea
batatasandDaucuscarota.
c) Floating habits – The parenchymatous tissue when encloses a lot of air space (referred as
aerenchyma) can provide buoyancy to the aquatic plant, e.g. in Jussiaea, cork cambium
produced at the time of secondary growth gives rise to parenchyma only that help in
buoyancy.
ii) Variation in the cambial activity – In nature there is variation in the position,
development, behaviour and/or nature of cambium found in some plants leading to varied
structural organizations. Such forms, with structural anomalies which are not because of the
environment, are referred to as non-adaptive type. This is found in many plants such as,
Boerhaavia, Mirabilis, Amaranthus, Chenopodium, Bougainvillea, Dracaenaetc.
6.4 SUMMARY
Most monocots either have no secondary growth or else anomalous secondary growth of
some type. For example, palm trees increase their trunk diameter due to division and
enlargement of parenchyma cells, which is termed diffuse secondary growth. In some other
monocot stems with anomalous secondary growth, a cambium forms, but it produces vascular
bundles and parenchyma internally and just parenchyma externally.The word anomalous
means deviating from the general or common order or type. Thus, the term, anomalous
growth reflects a growth condition which is not commonly seen and which is present in a
limited number of families or genera. This exercise explores a few examples of anomalous
growth; bear in mind, there are many to choose from! The examples here illustrate aspects
that are common - and include multiple cambia, included vascular bundles, and multiple
vascular cylinders. Whereas the development, arrangement, activity of the vascular cambium
in most woody dicotyledonous and Gymnospermous plants tends to be very similar, there are
some alternatives which produce new secondary tissues that do not follow a normal pattern.
As a result, the secondary plant structures that are formed are termed anomalous. Most
anomalous growth is associated with the formation of multiple cambia.
6.5 GLOSSARY
Cell membrane: A slim layer of fat and protein that surrounds a cell though still located
inside the cell wall. It is semi-permeable, which means it allows for some substances to pass
through it while keeping others out.
Cell wall: A tough, rigid layer that surrounds a plant cell. The cell wall is located outside of
the cell membrane and acts to support, filter incoming substances, and protect the cell from
over-expansion due to water intake. Cell walls can also attach to other cell walls to help form
the structure of a plant.
Chlorophyll: A green molecule vital for photosynthesis. Chlorophyll captures light energy
from the sun in order to convert carbon dioxide and water into oxygen and sugar for plant
consumption.
Chloroplast: Disc-shaped organelle containing chlorophyll and the location where
photosynthesis occurs.
Collenchyma: Tissue composed of cells with unevenly thickened walls.
Cotyledon: One of the first leaves of the embryo of a seed plant; seed leaf.
Cristae: The folded membranes inside the mitochondria. The walls of the cristae contain
proteins and are the site where cell energy production occurs (ATP is produced).
Cytoplasm: A gooey substance that contains all the cell's organelles outside of the nucleus.
Most cellular activity occurs within the cytoplasm.
Dicotyledon: Flowering plants that have two seed leaves that emerge after germination.
Monocotyledon: Flowering plants that have one seed leaf that emerges after germination.
Parenchyma: Thin-walled cells, varying in shape, size, and function.
Plasmodesmata: The site where communication and transport of materials between plant
cells occurs.
Phloem: The food-conducting tissue of a vascular plant.
Schlerenchyma: Tissue composed of thick-walled cells containing lignin for strength and
support.
Sieve element: Cell in the phloem tissue concerned with longitudinal conduction of food
materials. In flowering plants, it is called a sieve-tube element.
Sieve tube: A series of sieve-tube elements arranged end to end and interconnected through
sieve plates.
Vacuole: Membrane-lined area within a plant cell that is filled with water. This organelle
takes up much of the space inside a cell and help maintains its shape and size.
Vessel: A tube-like series of vessel elements with open ends. The walls that join the members
have perforations or holes in them to allow water to pass through freely.
Vessel element: Individual cells that make up vessels.
ii) The outer most part of the stele consists of one or more layers of parenchymatous cells.
The outer layer of this parenchyma is called:
(a) Cortex (b) Epidermis
(c) Stele (d) pericycle
iii) The type of arrangement in which protoxylem lies towards the outside and metaxylem lies
towards the inside is called:
(a) Mesarch (b) Endarch
(c) Exarch (d) None
iv) The case in which xylem is present towards the inner side and phloem is present towards
the outer side of vascular bundle is:
(a) Collateral (b) Bicollateral
(c) Concentric (d) Bilateral
6.7 REFERENCES
Esau, K. 1977, Plant anatomy. New York: John Wiley & Son.
Esau K. 1977, Plant anatomy. New York: John Wiley & Son.
Fahn, A. 1990, Plant Anatomy, Pergamon Press, Oxford 4th Edn.
Pandey,B. P., 2001, Plant Anatomy, Published by S. Chand Publisher.
Pandey, S.N., 1997, Plant Anatomy and Embryology, Pub.Vikas Publication House Pvt
Ltd.
Singh, V., 2010, Plant Anatomy and Embryology of Angiosperms, Global Media
Publications.
Vasishta, P.C. 1968, Plant Anatomy, Pradeep Publication & Co Chandigarh.
7.1 OBJECTIVES
7.2 INTRODUCTION
You must have noticed that all living organisms grow in size. But have you everthought how
do they grow? Growth takes place due to cell division, whichincreases the number of cells in
the body. Growth takes place at a faster rate till the plants attain maturity. Then it slows
downand at a particular time it stops. Later death occurs. All these changes thatoccur in an
organism starting from its beginning till its death may collectively betermed as development.
Plant hormones (also known as phytohormones) are chemicals that regulate plant growth.
Plant hormones are signal molecules produced within the plant, and occur in extremely low
concentrations. Hormones regulate cellular processes in targeted cells locally and, move to
other functional parts of the plant. Hormones also determine the formation of flowers, stems,
leaves, the shedding of leaves, the development and ripening of fruit. The term
'Phytohormone' was coined by Thimann in 1948. Synthetic chemicals showing the similar
effects as that of plant hormones are called plant growth regulators (PGR).
Plant hormones are not nutrients, but chemicals that in small amounts promote and influence
the growth, development, and differentiation of cells and tissues. Plants lack glands to
produce and store hormones, because, plants use more passive means to move chemicals
around their bodies. Hormones are transported within the plant by utilizing different types of
movements. For localized movement, cytoplasmic streaming within cells and slow diffusion
of ions and molecules between cells are utilized. Vascular tissues are used to move hormones
from one part of the plant to another; these include sieve tubes or phloem that move sugars
from the leaves to the roots and flowers, and xylem that moves water and mineral solutes
from the roots to the foliage.
1-Auxins
An experiment was performed by Fritz Went on oat seedling to see the effect of auxins.
When tip of oat coleoptile (early shoot) was removed, growth stops. Then the removed tip
was placed on a block of agar (gelatinous material from sea weeds) for about an hour. This
agar block was then placed on the cut end of the seedling. It was observed that the growth of
the seedling started again. It shows that there is something that has passed from the cut tip
into the agar block, which helped to restart the growth. This was named Auxin, a plant
hormone.
Auxin is a growth promoter, generally produced by the growing apex of stem and root of the
plants. The most widely studied naturally occurring auxin is indol-3-acetic acid (IAA), which
is chemically related to the amino acidtryptophan. IAA can be synthesized from tryptophan in
intact cells but other synthetic pathways are available. Auxins have an effect in very low
concentrations. Auxins are produced in young shoots and always travel downward in the
plant from shoot to root. There are some synthetic auxin like Indole-3-butyric acid (IBA), 2,
4-Dichlorophenoxy Acetic Acid (2, 4-D), and Naphthalene acetic acid (NAA).Synthetic
auxins such as NAA is used as rooting hormones. Other synthetic auxins include 2, 4-D and
2, 4, 5-T are used as weed killers.
Functions of Auxin
Apical Dominance: Removal of apical bud stimulates lateral buds. Auxins inhibit lateral
bud formation since they are synthesized in apex. This phenomenon is called apical
dominance. e.g.: Potato tubers for apical buds forming.
Cell Division and Elongation: Shoot and Root elongation is the result of auxin.
Xylem Differentiation: Auxins helps in the differentiation of different cells of xylem.
Nucleic Acid Activities of IAA increases total RNA - synthesizes specific enzymes lead
to cell enlargement.
Manifold Activities - Play specific role in seed germination, growth, rooting, flowering
(Reproductive phase), abscission, parthenocarpy and tissue culture.
2-Gibberellins
Gibberellin A1
Gibberellins, or GAs, include a large range of chemicals that are produced naturally within
plants and by fungi. They were first discovered when Japanese researchers, including Eiichi
Kurosawa, noticed a chemical produced by a fungus called Gibberellafujikuroi that produced
abnormal growth in rice plants. Gibberellins are important in seed germination, affecting
enzyme production that mobilizes food production used for growth of new cells. This is done
by modulating chromosomal transcription. In plants, it is produced in embryos, roots, and
young leaves and it enhances growth.
Gibberellins are a very large class of compounds, all with a similar chemical makeup. There
have been as many as eighty-four gibberellins identified (named GA1 to GA84), about 51
types are found in higher plants, but GA3 called gibberellic acid is most studied. Gibberellins
promote cell elongation, overcome genetic dwarfism, stimulate bolting in biennials, and are
involved in seed germination. During the germination of grass seeds the imbibition (intake)
of water stimulates the production of gibberellins by the embryo that diffuse throughout the
seed.
GAs are involved in many aspects of plant development, including seed germination,
trichome development, stem and leaf elongation, flower induction, anther development, and
fruit and seed development.
In grain (rice, wheat, corn, etc.) seeds, a layer of cells called the aleurone layer wraps around
the endosperm tissue. Absorption of water by the seed causes production of GA. The GA is
transported to the aleurone layer, which responds by producing enzymes that break down
stored food reserves within the endosperm, which are utilized by the growing seedling.
Functions of Gibberellins
Mechanism of Gibberellins: GA exerts its physiological effect on altering the Auxin
status of tissue. It acts at the gene level to cause depressions of specific gene.
The activated genes by producing new enzymes bring about observed morphologic
changes. Alerts the RNA. GA appears to involve in alteration of nucleic acid directed
protein synthesis in some long term regulatory action and some other types of activation
phenomena in short term regulatory action.
Mobility: Immobile obstructs the movement of amino acid, phosphate and various other
substances
Nucleic acid metabolism: Quick increase in the amount of RNA and decreases DNA
Protein synthesis: Increases DNA
Protein synthesis: Increased rate
Florigens: Induction of flowering in short day plants.
In general, it acts as an inhibitory chemical compound that affects bud growth, and seed and
bud dormancy. It mediates changes within the apical meristem, causing bud dormancy and
the alteration of the last set of leaves into protective bud covers. Since it was found in freshly
abscised leaves, it was thought to play a role in the processes of natural leaf drop, but
research has disproven this. Without ABA, buds and seeds would start to grow during warm
periods in winter and be killed when it froze again. Since ABA dissipates slowly from the
tissues and its effects take time to be offset by other plant hormones, there is a delay in
physiological pathways that provide some protection from premature growth. It accumulates
within seeds during fruit maturation, preventing seed germination within the fruit, or seed
germination before winter.
4-Cytokinins
Cytokinins are synthesized in root tips, endosperm of seeds, and young fruits where cell
division takes place continuously.Cytokinins work synergistically with auxin in the control of
tissue and organ differentiation. Cytokinins are transported in the xylemtoward the shoot.
Cytokinins are a group of chemicals that influence cell division and shoot formation. They
have a highly synergistic effect with auxins, and the ratio of these two plant hormones affect
most major growth periods during a plant's lifetime. Cytokinins counter the apical dominance
induced by auxins, they in conjunction with ethylene promote abscission of leaves, flower
parts, and fruits.Zeatin or isopentenyl adenineis a cytokinin and its name is derived from Zea,
in which it was first discovered in immature kernels
Functions of Cytokinins
(a) They stimulate cell division, cell enlargement and cell differentiation.
(b) They prevent aging of plant parts.
(c) They inhibit apical dominance and help in growth of lateral buds into branches.
(d)They also help delay senescence of tissues, are responsible for mediating auxin transport
throughout the plant, and affect internodal length and leaf growth.
5-Ethylene
Ethylene
Ethylene is the only gaseous hormone in plants. It is found in ripening fruits, young flowers
and young leaves. Ethylene is a gas that forms through the breakdown of methionine, which
is present in all cells. Ethylene has very limited solubility in water and does not accumulate
within the cell but diffuses out of the cell and escapes out of the plant. Ethylene is produced
at a faster rate in rapidly growing and dividing cells, especially in darkness.
Ethylene affects cell growth and cell shape, when a growing shoot hits an obstacle while
underground, ethylene production greatly increases, preventing cell elongation and causing
the stem to swell. The resulting thicker stem can exert more pressure against the object
making its path to the surface. If the shoot does not reach the surface and the ethylene
stimulus becomes prolonged, it affects the stem's natural geotropic response, which is to grow
upright, allowing it to grow around an object. Ethylene affects fruit-ripening. Normally when
the seeds are mature, ethylene production increases within the fruit, resulting in a favourable
event just before seed dispersal.
Functions of Ethylene
(a) It induces ripening of fruits.
(b) It promotes senescence and abscission of leaf, and flowers.
(c) In cells it only increases the width not the length.
(d) Ethylene is also considered a growth inhibitor as it may have a role in causing bud
dormancy, and it is involved with leaf abscission.
(e) It may determine sex in cucurbits (melon family).
(f) Stimulates formation of aerenchyma (gas transport tissue) in submerged roots and stems.
Objective
Students will observe effects of ethylene on ripening fruit.
Materials
i) an apple
ii) two green bananas from the same bunch
iii) two brown paper sandwich bags
iv) a knife
Procedure
1. Tightly seal a green banana in a paper bag.
2. In a second paper bag tightly seal a green banana with a slice of apple.
3. Observe the bananas daily for a week.
Anticipated Results
The cut apple produces and releases small amounts of ethylene gas. Ethylene gas plays a
rolein aging of plant tissues and ripening fruit. The presence of ethylene causes fruit to ripen.
Thebanana with the apple slice should ripen more quickly than the other.
controlled among the cells. However, the exogenous application of auxin moves the hair
position to the rootward end of the cells. Besides an involvement in the process of root hair
auxin also plays an important role in the elongation of root hairs (Cho et al., 2007).
The main hormones (intrinsic stimuli) and respective pathways responsible for root
architecture development include:
Auxin – Auxin promotes root initiation, root emergence and primary root elongation.
Cytokinins – Cytokinins regulate root apical meristem size and promote lateral root
elongation.
Gibberellins – Together with ethylene they promote crown primordia growth and
elongation. Together with auxin they promote root elongation. Gibberellins also inhibit
lateral root primordia initiation.
Ethylene – Ethylene promotes crown root formation.
Cutting off the tip and replacing it shows that something produced in the tip is influencing
the cells further down the shoot.
The substance produced in the tip is a chemical that can diffuse through plant tissue or
into agar gel. When you cut the tip off, the chemical is still produced and is collected in
the agar gel. The chemical then moves out of the gel into the shoot and stimulates growth
again. It could be called a ‗growth hormone‘.
Normally the tip produces a hormone that spreads down to the cells below. The cells
grow evenly all around the shoot and the shoot grows straight up.
When light coming from one side, growth is faster on the side away from the light. For
some reason, the concentration of hormone is less on the light side (or more on the dark
side). The part of the shoot on the side away from the light grows more, so the shoot
bends towards the light.
7.3.1-Root development
Plant hormones are important biotic factors to regulate root growth. Among the seven kinds
of plant hormones, auxin and gibberellin (GA) are strong accelerators of shoot growth, but
these are not always accelerators for root growth. The endogenous concentration of indole-3-
acetic acid (IAA) is inversely proportional to the growth rate. As massive IAA is transported
from shoots to roots by polar transport, the influx speed of IAA mainly controls IAA levels in
root cells.
Compared to auxins, GA functions in roots are less remarkable. Nevertheless, GA also plays
an indispensable role in the normal development of roots. Another interaction of IAA and GA
in growth regulation is the enhancement of GA1 level by IAA.
You might have noticed plants growing like those in this picture.
These seedlings are growing towards the light – their stems are bent and their leaves are
facing the sunlight in a way that exposes as much of the leaf as possible to the light. They are
showing a ―growing-toward-the-light-tendency‖ which biologists call ―positive
phototropism‖. This is a case of plants responding to a stimulus – the stimulus is light and the
response is how they grow.
Experiment-1
Procedure
The investigations described below are examples of work that has been done to try to work
out how positive phototropism happens. The seedlings used in these investigations were
cereals, such as barley. The shoots do not look the same as cress seedlings. They seem to
have no leaves; but in fact the early shoots are closed tubes with long narrow leaves inside.
This kind of shoot is called a coleoptile.
a. Two shoots were used. The tip of one was covered with a foil cap. The other was left
uncovered.
b. Both shoots were exposed to light from one side.
RESULT: Both shoots grow. One grows straight and the other grows towards the light.
Q.1.What does this investigation tell you about how plants respond to the stimulus of
light from one side?
Experiment-2
a. Two shoots were used. From one the tip was cut off and discarded. From the other the
tip was cut off and then put back.
b. Both shoots were left to grow with light coming from all sides.
RESULT: The shoot with the discarded tip stopped growing. The shoot whose tip was
replaced continued to grow.
Q. 2. What does this tell you about how the tip of a plant shoots control growth?
Experiment-3
As in experiment-2, the tip of a shoot was cut off, but this time placed on an agar gel.
RESULT: Growth of the coleoptile stopped.
a. Then the agar gel was placed on the cut end of the shoot.
Experiment- 4
Q. 4. What does this result tell you about what might be happening within the shoot tip?
Experiment -5
i) The tip of a shoot growing in the light was cut off and placed on agar jelly for an hour.
ii) Two more shoots were then cut to remove their tips. The part of the jelly from right
under the first tip shoot was then placed on the edge of one cut shoot, and a fresh piece of
jelly on the edge of another.
iii) Both were left in the dark for 3 hours.
RESULT: The shoot with fresh jelly did not bend. The shoot with agar from underneath
a cut tip bent – with the side underneath the agar elongating compared to the other side.
Answers:
Q. 1. The first experiment suggests that it is the tip of the plant that is sensitive to light. In the
absence of light, the shoot keeps growing, but does not grow towards the light.
Q. 2. This tells us that the tip is important in keeping a plant growing. Cutting off the tip
stops growth. But replacing it starts growth happening again. If there was an electrical
connection (like a nerve impulse) between the tip and the rest of the shoot, cutting it off and
replacing it would probably break the connection. So, the message from the tip is likely to be
a chemical message (like a hormone) not an electrical message.
Q. 3. This tells us that something from the shoot tip can pass into agar gel and that something
(probably a chemical messenger) can re-start growth in a cut shoot.
Q. 4. This tells us that something from the shoot tip (probably a chemical messenger) can
pass through gelatin, but not through foil.
Q. 5. This tells us that something from the shoot tip can make a shoot grow unevenly if it is
put on one side of the shoot only. So, if a chemical messenger is at a higher concentration on
one side of the shoot than the other, the shoot will grow more on one side and bend. It could
bend towards a stimulus (such as light). Perhaps, somehow, light changes the concentration
of the chemical messenger and this is how the shoot responds to the stimulus.
7.3.2-Senescence
Plant senescence is the process of aging in plants. Plants have both stress-induced and age-
related developmental aging. Chlorophyll degradation during leaf senescence is common.
Leaf senescence has the important function of recycling nutrients. Senescence occurs due to
the deposition of waste material. In some plants the whole plant dies after flowering and
producing seeds. This is called whole plant senescence. In many other plants, parts above soil
die each year and root system stays alive. This is called organ or shoot-senescence.Abscissic
acid and ethylene promote senescence of leaves but cytokinin delays senescence and helps
leaves remain green for longer period.
Programmed senescence seems to be heavily influenced by plant hormones. The hormones
abscissic acid, ethylene, and salicylic acid are accepted by most scientists as promoters of
senescence.Cytokinins help to maintain the plant cell and prevents leaf senescence.
Withdrawal of cytokinin, or if the cell cannot perceive the cytokinin, it may then undergo
apoptosis or senescence.
Materials Required
Observations
The pollen grain is uninucleate in the beginning. At the time of liberation, it becomes 2
celled, with a small generative cell and a vegetative cell.In the nutrient medium, the pollen
grain germinates. The tube cell enlarges and comes out of the pollen grain through one of the
germ pores to form a pollen tube. The tube nucleus descends to the tip of the pollen tube. The
generative cell divides into two male gametes which are also seen in the pollen tube.
7.4 SUMMARY
1. Growth in living organisms results from increase in the number and size of a cell, organ
or whole organism.
2. Development is the whole series of qualitative and quantitative changes (growth,
differentiation, maturation), which an organism undergoes throughout its life cycle.
3. Plants show three phases of growth - Lag Phase, Log Phase, and Stationary Phase
4. Auxanometer is specially designed equipment used to measure the rate of growth of shoot
length of plants.
5. The internal factors responsible for plant growth are auxin, gibberellins, cytokinins,
ethylene, and abscissic acid. These are substances produced in a small quantity in one part
of plant body and capable of moving to other parts to influence the growth of that part.
6. Florigen is a plant hormone, which is responsible for initiation of flowering in plants.
7. Senescence is a gradual process during which any plant part or the whole plant
completely loses its function and ultimately dies.
8. The process of detachment of any leaves, fruits, flower or any part of the plant from the
main body after getting older is called abscission.
9. Any change in the environmental conditions that may adversely affect the growth or
development in plants is called biological stress. This stress occurs mainly due to
temperature, water, salt, shade, light, and various pollutants.
10. During phototropism and geotropism, the plant hormone (auxin) controls cell elongation.
11. The plant hormone (cytokinin) promotes cell division, controlling many developmental
processes in plants.
12. Gibberellins control many aspects including shoot elongation, seed germination, fruit and
flower maturation, seed dormancy, gender expression, seedless fruit development, and the
delay of senescence in leaves andfruits.
7.5 GLOSSARY
Auxin: Growth hormones that is responsible for elongation in phototropism and gravitropism
and for other growth processes in the plant life cycle
Chemotropism: Plant growth response to a chemical.
Cytokinin: Plant hormones involved in cell growth and divisionanddelaythesenescence of
leaves
Gibberellin: Plant growth hormones that stimulate shoots elongation, seed germination, and
fruit and flower maturation.
Geotropism: Plant growth response to gravity.
Nyctinastic: Plant movements in response to the daily cycle of light and dark.
Photoperiodism: it is a plant's response to changes in the length of days and nights.
Phytochrome: Plants monitor changes in day length with a bluish, light-sensitive protein
pigment called phytochrome.
Thigmonastic: Nastic movements that occur in response to touching or shaking a plant.
Vernalization: It is the low-temperature stimulation of flowering.
1. A colorless gas that speeds the aging of plant parts, particularly fruit
2. A group of hormones that have a primary role in promoting cell elongation
3. A plant‘s response to the source of light
4. Inhibit cell elongation and keep plants compact
5. A response to mechanical stimuli
6. A plant response to gravity
7. Natural occurring or synthetic chemicals that regulate plant growth and development
8. A growth-inhibiting hormone largely responsible for seed dormancy
9. Plays a key role in the development of flowers and in the production of enzymes during
seed germination
10. Hormones responsible for cell division and differentiation
5. Which plant hormone encourages the growth of lateral shoots, inhibits the branching of the
roots, and is an ingredient in tissue culture medium?
grapes, to produce larger fruit. Cytokinins have been shown to extend the shelf life of lettuce.
Cytokinins are also an important ingredient of tissue culture medium, as they promote cell
division. Ethylene is used in the ripening of fruits before being placed on grocery shelves.
Growth retardants are widely used in the horticulture industry to keep plants compact.
Growth regulator herbicides disrupt hormone balance and protein synthesis.
7.7 REFERENCES
Andres, M., J. Rodriguez, J. Duran, 1999.Pollen viability of apricot,InvestigAgrar Prod
Prot Veg, 14 (1999), pp. 25-32
Bayazit, S., B. Imrak, O. Çalişkan, 2012.Determination of pollen production and quality
attributes of some almond cultivars (Prunus dulcis) and select wild almond
(Amygdalusorientalis) genotypes. Int J AgricBiol, 14 (2012), pp. 425-429.
Cho Y, et al., 2007. The Fus3/Kss1 MAP kinase homolog Amk1 regulates the expression
of genes encoding hydrolytic enzymes in Alternariabrassicicola. Fungal Genet Biol
44(6):543-53
Dafni, A., D. Firmage, 2000.Pollen viability and longevity: practical, ecological and
evolutionary implications. Plant SystEvol, 222 (2000), pp. 113-132.
Dicenta, F., E. Ortega, J. Cánovas, J. Egea, 2002.Self-pollination vs. cross-pollination in
almond: pollen tube growth, fruit set and fruit characteristics Plant Breed, 121 (2002), pp.
163-167
Heslop-Harrison, J., Y. Heslop-Harrison, 1970.Evaluation of pollen viability by
enzymatically induced fluorescence; intracellular hydrolysis of fluorescein diacetateStain
Technol, 45 (1970), pp. 115-120
Hewitt, F., T. Hough, P. O'Neill, J. Sasse, E. Williams, K. RowanEffect of brassinolide
and other growth regulators on the germination and growth of pollen tubes of Prunus
avium using a multiple hanging-drop assay.
Sutyemez, M, 2011. Pollen quality and pollen production in some almond cultivars under
Kaharamanmaras (Turkey) ecological conditions Afr J Agric Res, 6 (2011), pp. 3078-
3083
Wang, Z., P. Zheng, J. Meng, Z. XiEffect of exogenous 24-epibrassinolide on chlorophyll
fluorescence, leaf surface morphology and cellular ultrastructure of grape seedlings
(Vitisvinifera L.) under water stress
Yakhin, O., A.Lubyanov, I. Yakhin, 2012.Changes in cytokinin, auxin and abscissic acid
contents in wheat seedlings treated with the growth regulator StifunRuss J Plant Physiol,
59 (2012), pp. 398-405, 10.1134/S1021443712030193
8.1 OBJECTIVES
8.2 INTRODUCTION
The plants which characteristically grow in certain environment often show the structure
which is believed to be adapted to that particular environment. In the course of evolution,
many species have become adapted in their structural and physiological features to habitats
either with an excessive water or deficiency in water.
Plants that live wholly or partly submerged in water or in very wet places are known as
hydrophytes while the larger numbers of plants grow under average conditions of moisture
and temperature. Plants of habitat that usually show neither an excess nor a deficiency of
water are known as mesophytes.Plants that grow in places where the evaporation stress is
high and the water supply is low are known as xerophytes.Mesophytes are therefore,
intermediate between hydrophytes and xerophytes.
In this section we have chosen one hydrophyte (Hydrilla), onemesophyte (Ranunculus) and
one xerophyte (Euphorbia) to study the anatomical detailswith variation in stem anatomy.
Hydrophytes are characterized by large number of air chambers within the tissue of stem and
leaves which help them in buoyancy as well as storing oxygen.Root system, vascular tissue,
stomata etc are poorly developed. Cuticle layer in leaves is mostly absent.Thick walled tissue
is altogether absent.
In mesophytes the root system is well developed with the tap-root system and branched in
dicotyledons, while a cluster of fibrous roots in monocotyledons; root hairs are abundantly
produced for the absorption of water from the soil.
In mesophytes the stem is solid, erect and normally branched. All the different kinds of
tissues, particularly the mechanical and conducting tissues have reached their full
development. The aerial parts of plants such as the leaves and the branches are provided with
cuticle. In dorsiventral leaves the lower epidermis is provided with numerous stomata, there
are few stomata or none at all on the upper surface.
In erect leaves of most monocotyledons, stomata are more or less equally distributed on both
surfaces. The stomata are relatively uniform in structure and the guard cells show a maximum
capacity for movement. The anatomy of mesophytic plants is quite normal and no special
adaptations are found in them.
Xerophytes growing in very dry places can withstand a prolonged period of drought
uninjured, and for this purpose they have certain peculiar adaptations. The xerophytic plants
have to guard against excessive evaporation of water, by reducing evaporating surfaces.
Plants produce a long tap root which goes deep into the sub-soil in search of moisture. To
retain the water absorbed by the roots, the leaves and stems of some plants become very thick
and fleshy (e.g., Aloe, Agave). Multiple epidermis sometimes develops in the leaf (e.g.,
Nerium). In xerophytes certain structural features are also common. Leaves are thick and
leathery, with a well-developed cuticle and abundant hairs. Well differentiated mesophyll and
more than one layer of palisade tissue (e.g., Nerium). The walls of epidermal and sub-
epidermal cells are frequently lignified, and a distinct hypodermis, may be present. They have
a well-developed vascular system and often an abundance of sclerenchyma, either in the form
of sclereids or fibres. The leaf is sometimes cylindrical or rolled. This organization is to
protect the stomata, which may occur in furrows.
8.3.1-Hydrilla verticellata
Hydrilla (Waterweed) is a genus of aquatic plant, usually treated with one species, Hydrilla
verticillata. The stems grow up to 1–2 m long. The leaves are arranged in whorls of two to
eight around the stem, each leaf 5–20 mm long and 0.7–2 mm broad, with serrations or small
spines along the leaf margins; the leaf midrib is often reddish when fresh. It is monoecious
(sometimes dioecious), with male and female flowers produced separately on a single plant;
the flowers are small, with three sepals and three petals, the petals 3–5 mm long, transparent
with red streaks. It reproduces primarily vegetatively by fragmentation and by rhizomes, and
flowers are rarely seen. They have air spaces to keep them upright.
The inflorescences are unisexual, arising from spathes situated in the leaf axils; each flower
has three sepals and three petals. All six perianth parts are clear or translucent green (the
sepals usually slightly reddish).The male spathe is about 1.5 mm long, solitary in the leaf
axils, somewhat spiny. The female spathe is about 5 mm long, solitary in the leaf axils. There
are three petals, three stamens and three styles. The ovary is cylindrical to narrowly conical
and is enclosed in the base of a hypanthium; the style is as long as the hypanthium and there
are three stigmas.
Chambers and passages filled with gases are commonly found in the leaves and stems of
hydrophytes. The air chambers are large, usually regular, intercellular spaces extending
through the leaf and often for long distances through the stem (e.g., Hydrilla, Potamogeton,
Pontederia).
The spaces are usually separated by partitions of photosynthetic tissue only one or two cells
thick. The chambers prepare an internal atmosphere for the plant. These air- chambers on the
one hand give buoyancy to the plant for floating and on the other they serve to store up air
(oxygen and carbon dioxide).
Here, very thin partitions enclose air spaces and the whole structure consists of very feeble
tissue. Aerenchyma is phellem formed by a typical phellogen of epidermal or cortical origin.
At regular intervals individual cells of each layer of phellem elongate greatly in the radial
direction while the other cells of this layer remain small.
However, the term aerenchyma is applied to any tissue with many large intercellular spaces,
but such aerenchyma is quite distinct from the typical aerenchyma mentioned above which is
of secondary origin.
Fig. 8.3.T.S. of Hydrilla Root Showing Air Spaces in Cortex and Single Xylem Cavity
Stem is usually weak and flexible. Sometimes it is covered by a gelatinous sheath which
serves as protection against periodic desiccation.
The cuticle is either altogether absent or very poorly developed. The epidermis is always
single-layered and thin-walled; this character facilitates direct absorption of gases and
mineral salts dissolved in water.
The cortex is very broad and occupies bulk of the stem. The outer layers of the cortex are
parenchymatous and usually without inter-cellular air spaces, whereas the inner cortex is
aerenchymatous and possesses symmetrically arranged large air spaces. The air filled in
these cavities adds to the buoyancy of the plant and secondly facilitate the exchange of
gases during respiration and photosynthesis.
The cells of the cortex contain chloroplasts and assist in carbon assimilation.
Usually there is no marked distinction of endodermis and pericycle. Sometimes the inner-
most layer of the cortex is regarded as endodermis.
Vascular tissue is poorly developed and does not show marked differentiation of phloem
and xylem. An air cavity is mostly present at the center of the vascular strand that adds to
the buoyancy of the plant. Sometimes, xylem is represented by a single strand present in
the center of the stele (e.g., Hydrilla, Potamogeton, Elodea etc.)
There is no mechanical tissue present in the stem of the submerged plant. Water column
itself provides mechanical support to the plant.
8.3.2-Ranunculus scleretus
Ranunculus sceleratus is an annual herb growing up to half a meter tall. The leaves are more
or less glabrous (hairless) and have small blades each deeply lobed or divided into three
leaflets. They are borne on long petioles. The flowers are 5-10mm across with five or fewer
yellow petals a few millimetres long and reflexed sepals. The fruit is an etario ofachenes
borne in cluster.
Fig.8.7 T.S. Through Stem of Ranunculussps. Showing Lacunate Parenchyma (LP) &
Pith cavity (PC)
(A)
(B)
In this low magnification image of a Ranunculus stem, attributes of a dicot stem can be
viewed. This dicot stem contains vascular bundles arranged in a concentric ring. This is
somewhat similar to the arrangement of vascular tissues in a monocot root.
The epidermis appears thicker due to a cuticle or waterproofing layer. Trichomes and
stomata may be present.
The cortex is made up of the multiple layers of cells between epidermis and pericycle.
There are three sub-zones in the cortex. The outer sub-zone is called hypodermis. The
hypodermis is composed of a few layers of collenchyma. The middle layer is composed
of thin-walled parenchyma with distinct air spaces called aerenchyma. The innermost
layer is called endodermis.
Endodermal cells are rich in starch grains and hence this layer is also called the starch
sheath. Pericycle is present on the inner side of endodermis and above the phloem. The
pericycle is in the form of semi-lunar patches of sclerenchyma.
A large number of vascular bundles are arranged in a ring. It is important to remember
that the ring-like arrangement of vascular bundles is the characteristic of dicot stem. Each
vascular bundle is conjoint, collateral and open. Protoxylem is endarch. Each vascular
bundle is capped by sclerenchymatousfibers.
Usually pith is composed of rounded parenchymatous cells; with large intercellular
spaces but in case of Ranunculus it is hollow. The deepest parenchyma cells of this stem
are fragmented during growth to produce the hollow pith area.
8.3.3-Euphorbia hirta
Euphorbia hirta L. belongs to the family Euphorbiaceae, widespread at low altitudes
throughout the tropics and subtropics. It prefers sunny to lightly shaded dry conditions. It is
an early colonizer of bare ground. E. hirta is one kind of weed in cultivated fields of
perennial crops, grasslands, roadsides, gardens, lawns, fallow lands, ditch banks and waste
places. It is a slender- stemmed when mature, annual hairy plant with many branches from
the base to top, spreading upto 40 cm in height, reddish or purplish in colour.Euphobiahirta is
used in the treatment of gastrointestinal disorders, bronchial and respiratory diseases, and in
conjunctivitis. Hypotensive and tonic properties are also reported in E. hirta.
Macroscopic characters of E. hirta leavesshows composition of leaf is simple with dark green
color having no odour, about 2-6cm. long in size, shape is ovate, texture is hairy, apex is
acute and midrib is distinct on both the sides. T.S. of leaf revealed the presence of stomata on
upper and lower epidermis. Powder characteristics revealed the presence of starch granules.
Stem Anatomy:
8.4 SUMMARY
Let‘s take a look at the anatomy of dicotyledonous and monocotyledonous plants. In this
section we have discussed Hydrilla a monocot, Ranunculus and Euphorbia spp. the dicots
Hydrilla stem is usually hollow with no secondary growth. The anatomy of monocot and
dicot stem are similar, however some notable differences are as follows:
The hypodermis of the cortex in monocots is made of sclerenchymatous cells.
Vascular bundles are numerous but scattered, conjoint and closed, surrounded by the
ground tissue.
Phloem parenchyma is absent.
Plant shows hydrophytic characters as the vascular tissue is poorly developed and
does not show marked differentiation of phloem and xylem. An air cavity is mostly
present at the center of the vascular strand in addition to air chambers in the cortical
region that adds to the buoyancy of the plant.
Dicotyledonous stem of Ranunculus and Euphorbia is usually solid. The transverse section of
their stems consists of the following parts:
Epidermisis the outermost protective layer which is covered with a thin layer of
cuticle.
Epidermis possesses trichomes and a few stomata.
Cortex is multi-layered sandwiched between epidermis and pericycle.
The outer hypodermis, the middlecortical layers and the inner endodermis together
make the three subzones of cortex.
Next to endodermis is the pericycle which is constituted of semi-lunar patches of
sclerenchyma.
Ring arrangement of vascular bundles is present (only in dicot stem).
Vascular bundle is conjoint, collateral and open with endarch protoxylem.
Pith is evident and is made of parenchymatous cells but hollow in Ranunculus.
8.5 GLOSSARY
Adaxial Surface-The upper surface of a leaf, harvests light. This side is closer to the
meristem in the leaf primordia.
Aerenchyma- Parenchyma with large intercellular air spaces.
Angular -Ridged along its length, these ridges appearing as angles in the cross-section.
Antrorse -Projecting forwards; used for an arrangement of hairs, the anther or less
commonly the column wings.
Apex -The tip or end.
Bilocular -With two cavities or locules.
Bisexual -Both male and female sexes present.
Bristly - With stiff hairs or bristles.
Dimorphic -Existing in two different forms.
Dimorphism -The non-flowering plants are strikingly different to the flowering plants.
Dissected -Deeply divided into segments.
Distal - Away from the base towards the apex.
Distichous -In two ranks; usually applied to the arrangement of leaves or flowers.
Dorsal -The upper or outer surface or edge.
Epidermis -The outermost layer of cells covering the leaves.
Mesarch - A type of xylem maturation in which the protoxylem is embedded in
the metaxylem and development proceeds both centripetally (from the outside in) and
centrifugally (from the inside out); compare to endarch and exarch
Mesophyll -Parenchyma tissue between the upper and lower epidermis of a leaf
Metaxylem -Type of primary xylem that differentiates and matures later than
the protoxylem; generally metaxylem tracheids are longer than protoxylem
Parenchyma -The most common type of plant cell; thin-walled cells varying in size, shape,
and function
Periderm -A tissue primarily consisting of cork cells; outer bark
Phloem -Photosynthate conducting tissue of vascular plants
Pith -The central parenchymatous tissue in a vascular plant axis
Prostrate - Lying flat.
Proximal - Situated near the point of attachment.
Sessile - Without a stalk, pedicel or petiole.
Sheath - The base of a leaf or bract which embraces a bud or axis.
Shoot -A horticultural term used by growers for a new growth.
Terminal - The apex or end.
Vascular -Said of plants which have water-conducting tissue.
2. A narrow layer of thin walled cells found between phloem/bark and wood of a dicot is
(a) cork cambium (b) vascular cambium
(c) endodermis (d) pericycle
8.7 REFERENCES
"The Plant List: Ranunculus sceleratusL.".Royal Botanic Gardens, Kew and Missouri
Botanic Garden. 2013. Retrieved 27 May 2016.
Metcalfe CR and Chalk L. 1950. Anatomy of the Dicotyledons: Leaves, Stem and Wood
in Relation to Taxonomy with Notes on Economic Uses. Oxford: Oxford Clarendon
Press, v. 1. 1500 p.
Prajapati ND, Purohit SS, Sharma AK and Kumar T. 2003.Handbook of Medicinal
Plants. Jodhpur, India: Agarbios.
Raju VS and Rao PN. 1977. Variation in the structure and development of foliar stomata
in the Euphorbiaceae. BotanicalJournal of the Linnean Society, 75: 69-97.
Rosowski JR. 1968.Laticifer morphology in the mature stem and leaf of Euphorbia
supina.Botanical Gazette, 129: 113-120.
Sehgal L and Paliwal GS. 1974. Studies on the leaf anatomy of Euphorbia venation
patterns. Botanical Journal of theLinnean Society, 68: 173-208.
Sereena K and Shahida TA. 2015. Comparative anatomical and histochemical studies of
Euphorbia hirtaL. andEuphorbiathymifoliaL. (stem). IJPSR, 6 (2): 772-777.
Solereder H. 1908. Systematic Anatomy of the Dicotyledons.Oxford, Clarendon Press.p.
643.
Sultana RS. 2016. Stem and leaf anatomy of Lantana camaraL. - a Plant of the
Verbenaceae Family. Int. J. Curr. Res.Biosci. Plant Biol., 3 (1): 27-31.
Williamson EM. 2002. Major Herbs of Ayurveda. China: Churchill Livingstone.
Zahra NB, Ahmad M, Shinwari ZK, Zafar M and Sultana S. 2014.Systematic
Significance of anatomical characterizationin some euphorbiaceous species.Pak. J. Bot.,
46 (5): 1653-1661.
9.1 OBJECTIVES
After reading this unit students will be able -
To determine the minimum size of quadrat by species curve method.
To determine the minimum number of quadrats to be laid down for vegetational
analysis of the given area.
9.2 INTRODUCTION
Vegetation, as you know, includes all plants of an area. It is made-up of small groups of
populations which forms a community. Study of entire plant community or segment thereof
cannot be measured, even if it is small. Therefore, we have to depend on samples, based on
sampling methods drawn from a community to approximate the structure of entire
community. So we have to select the samples cautiously in such a way that the data so
generated could be utilized to estimate the nearly true value as accurately as possible. The
minimum size and minimum number of samples are determined to get the accuracy of data
and to avoid the waste of energy of the worker involved in analysis. Mainly three types of
sampling methods are used for vegetation study. These are: Quadrat, Transect and Point
methods. Of these, quadrat method is commonly used for vegetation sampling.
We must know what is a quadrat? It is a sampling unit of varying shapes and sizes, the
selection of which depends on convenience and usefulness. It can be rectangular, circular or
square. Compared to rectangular and circular quadrats, square quadrat is preferable. Though
square quadrats are often used, rectangular quadrats are also better because most plant
distributions are clumped, and a rectangle can best encompass patches of different species.
But a rectangular quadrat should not be more than two to four times as long as it is wide; as
the ratio of length to width increases, the amount of border relatives to area increases, causing
increased error from the edge effects (generally too many individuals near border are
counted) (Singh et al. 2006). A quadrat may be of either types: (i) List (for listing of all
species present), (ii) Count (for determining the individuals of species), (iii) Cover (for
determining basal area or canopy of species), (iv) Chart (for mapping the plants within the
quadrat), (v) Clip or Harvest (for determining biomass or the weight of plants) and, (vi)
Denuded quadrat (for determining the sequence or development of vegetation overtime,
following a treatment (Singh et al. 2006)).
The size of quadrat varies in accordance with the size of plants to be sampled. Commonly
used quadrats for density measurements are: 10 x 10 m for tree layer, 5 x 5 m for woody
under growth upto 3.0 m height, and 1 x 1 m or less for herb layer (Oosting 1956). The
number of quadrats should be such as to sample about 20 per cent of the vegetation of an
area.
The size of quadrat in which maximum number of diversity of species can be recorded, is
called as ―minimum size of quadrat‖ for a particular area. Similarly, the number of quadrats
Fig. 9.1.a. Increasing size of quadrats and the number of species in a stand
10 x 10 4
20 x 20 16
30 x 30 26
40 x 40 30
50 x 50 30
1 7
2 7
3 8
4 8
5 10
6 11
7 12
8 12
9 13
10 13
11 15
12 15
13 16
14 17
15 17
16 19
17 19
18 20
19 20
20 22
21 22
22 22
23 22
24 22
25 22
Twenty (20) quadrats minimum are required for studying vegetation at this site.
9.5 SUMMARY
From the above description, you now understand how to identify the minimum size and
number of quadrats for studying the vegetation of a given area. It needs careful observation of
species count and proper placing of the quadrats of varying sizes. The human bias in locating
quadrat in the field must be as negligible as zero to obtain accuracy in findings. The
minimum size and number of quadrats so determined could be used for studying vegetation
for different analytical characteristics.
9.6 GLOSSARY
Cover: Ground area occupied by a species
Canopy: Crown of a species
Quadrat: A sampling unit of definite shape and size
Community: A naturally occurring, mutually sustaining, and interacting assemblage of
plants and animals living in the same environment and fixing, utilizing and
transferring energy in some manner.
Stand: The vegetation of a plot of suitable size is a stand.
Association: It is a product of artificial synthesis of stands and an abstract unit of vegetation.
9.8 REFERENCES
Oosting, H.J. 1956. The Study of Plant Communities: An Introduction to Plant Ecology,
Second Edition, W.H. Freeman, San Francisco.
Singh, J.S., S.P. Singh and S.R. Gupta. 2006. Ecology, Environment and Resource
Conservation, (Reprinted 2008), Anamaya Publishers, New Delhi.
Michael, P. 1984. Ecological Methods for Field and Laboratory Investigations (Reprinted
1986), Tata McGraw-Hill Publishing Co. Ltd., New Delhi.
Misra, K.C. 1989. Manual of Plant Ecology, Oxford and IBH Book Co., New Delhi.
Misra, R. 1968. Ecology Work Book, Oxford and IBH Book Co., New Delhi.
Misra, R. and G.S. Puri. 1954. Indian Manual of Plant Ecology, Oxford and IBH Book
Co., New Delhi.
Pandey, S.C., G.S. Puri and J.S. Singh. 1968. Research Methods in Plant Ecology, Asia
Publishing House, New Delhi.
10.1 OBJECTIVES
After reading this unit students will be able -
To determine frequency, density and abundance of plant species in a community by
quadrat method
Comparison of observed frequency with Raunkiaer‘s normal frequency diagram
10.2 INTRODUCTION
A plant community or stand is generally studied using qualitative and quantitative
characteristics. The qualitative characteristics are descriptive. These prominently include
presence/absence of the given species, genera and family among sites. These describe
community structure, composition and other features using visual observations without actual
measurements. The quantitative analysis deals with the structure and composition of
vegetation across vegetation types or communities, and compares them in terms of attributes,
such as, frequency, density, abundance, etc.
Frequency class: Among the early plant ecologists, C. Raunkiaer (1934) concentrated on
plant frequencies. Raunkiaer‘s law of frequency includes five frequency classes based on
frequency value (20% interval) as follows:
>
A>B>C=D<E
<
In general, higher values of classes B, C and D indicate heterogeneity of the stand, and
greater value of class E shows homogeneity of the stand. If the value of the ratio
(E+D)/(B+C) is < 1.0, the stand is heterogeneous, whereas the stand is homogenous if the
value is > 1.0.
On the basis of the study of large samples (some 8087 frequency percentages), Raunkiaer
prepared a Normal Frequency Diagram in which frequency classes A included 53% of the
species, B 14%, C9%, D8% and E16% as shown in Fig. 10.1.
After studying the frequency of different species in a locally available stand, students may
assign frequency class to each species calculating the percentage of each class mentioned by
Raunkiaer and a comparison with Raunkiaer‘s normal frequency diagram can be made and
drawn in the graph sheet.
Density (Indv./Quad.) =
10.3.3 Abundance: For this attribute, only quadrats where a species present are taken into
consideration. Thus:
Abundance =
Method
After understanding the concept, you would like to apply it. To study frequency, density and
abundance, first determine the minimum size of quadrat (sample plot) and quadrat numbers
(sample numbers) using species area curve and species number curve, respectively as
described in Unit 09 earlier. Generally, a quadrat of minimum size 50 x 50 cm for herbaceous
vegetation, 5 x 5 m for shrub species and 10 x 10 m for tree species is used. The number of
samples to be studied is generally a minimum of 10. The quadrat is laid randomly in the
stand. For the study of frequency, the presence (+) and absence (-) of the species is recorded
in each quadrat. The data so collected are put in a tabular form (Table 10.1) to draw the
frequency diagram using different frequency classes.
Table 10.1 Frequency (%) of plant species studied in a given stand
studied
For measurement of density and abundance the number of rooted individuals of the species
are recorded and tabulated as presented in Table 10.2.
Name No. of rooted individuals in each Total No. No. of No. of Density Abundance
of the quadrat of rooted quadrats quadrats
species individuals of studied
1 2 3 4 5 6 7 8 9 10 occurrence
After arranging data in tabular form, analyze the data and present them as ―Results‖. It is to
be followed by discussion which must justify the findings with valid site-specific reasons.
10.4 SUMMARY
Community is characterized by species diversity, different growth forms and successional
stages. For the study of any community or stand a number of parameters are taken into
consideration. These are then used to express the characteristics of a community. Any
community can be studied by analyzing various attributes and these analytical characters may
be qualitative or quantitative. Quantitative characters include frequency, density, abundance
cover and basal area of which first three attributes have been discussed in this chapter.
10.5 GLOSSARY
Quadrat: It is a sample plot of known area.
Community: A naturally occurring, mutually sustaining, and interacting assemblage of
plants and animals living in the same environment and fixing, utilizing and
transferring energy in some manner.
Stand: The vegetation of a plot of suitable size is a stand.
Association: It is a product of artificial synthesis of stands and an abstract unit of vegetation.
10.7 REFERENCES
Raunkiaer, C. 1934. The Life Forms of Plants and Statistical Plant Geography, Clerendon
Press, Oxford.
11.1 OBJECTIVES
After reading this unit students will be able-
to determine the mean basal area (cover) and total basal area (cover) of grassland.
to determine the mean basal area (cover) and total basal area (cover) of woody (tree)
community.
11.2 INTRODUCTION
Cover or coverage or area of a plant species is an expression of the ground area occupied or
covered by that species. It is expressed in two ways:
I. Canopy cover or crown cover: It refers to the ground area covered by the crown or
canopy or aboveground parts of a species when canopy is projected vertically to the
ground.
II. Basal area or cover: It is the ground area actually penetrated by the stem or shoot of a
species.
Compared to the density values, cover is given a greater ecological significance as it provides
a better estimate of plant biomass. It is also the most suitable measure for recording the
change in a stand. The basal cover or basal area is regarded as an index of dominance of a
species. Thus, a higher basal area is an expression of dominance of a species. The grassland
species are entirely different than woody species. Therefore, methods for determining basal
area (cover) for these species are described separately as follows:
Vernier caliper, Screw guage, thread, meter tape, note book etc.
r = Circumference/2π
The basal area (cover) os each tree species is either calculated or recorded directly through
conversion table as given in Tables 11.1 and 11.2. The basal area of an average tree when
multiplied by density gives the value of total basal area.
Circumference (inch) Basal Cover (inch2) Circumference (inch) Basal Cover (inch2)
Diameter (inch) Basal Cover (inch2) Diameter (inch) Basal Cover (inch2)
3.00 7.07
11.6 SUMMARY
You must have now understood mean and total basal area (cover) of a species and the canopy
cover. The area occupied by the stem or shoot of an individual species on the ground of a
stand is the basal area (cover) whereas area covered by crown of the species is canopy cover.
The value of basal cover gives you information about dominance of the species or change in
the area occupied by a species over a period of time.
11.7 GLOSSARY
Breast height: Height at breast level of a normal human. It is generally considered as 1.37 m
above the flat ground.
Canopy: Crown of a species
Cover: Ground area occupied by a species
Community: A naturally occurring, mutually sustaining, and interacting assemblage of
plants and animals living in the same environment and fixing, utilizing and
transferring energy in some manner.
Stand: The vegetation of a plot of suitable size is a stand.
Quadrat: A sampling unit of definite shape and size
11.9 REFERENCE
Kapur, P. and S.R. Govil. 2000. Experimental Plant Ecology, CBS Publishers and
Distributers, New Delhi.
12.1 OBJECTIVES
After reading this unit student will be able:
to know about mean
to know about Median
to know Mode
to understand standard deviation
to know about the chi-square test
12.2 INTRODUCTION
Statistics refers to the subject of scientific activity which deals with the theories and methods
of collection, analysis and interpretation of such data. Term biostatistics is used when tools of
statistics are applied to the data that is derived from biological field.
Characteristics of Biostatistics
1. Biostatisticsis the aggregate of facts.
2. Biostatistics is numerically expressed.
3. Biostatistics is affected by multiplicity of causes and not by single cause.
4. Biostatistics must be related to the same field of inquiry.
5. Biostatistics should be capable of being related to each other, so that some causes and
effects on relationship can be stabilised.
6. The reasonable standard of accuracy should be maintained in statistics.
Limitations of Statistics
1. Statistics can be used to analyse only collective matters not individual events
2. it is applicable only to quantitative data
3. Statistical results are ascertained by samples. If the selection of samples is biased errors
will accumulate and results will not be reliable
4. The greatest limitations of statistics is that only one who has an expert knowledge of
statistical methods can efficiently handle statistical data
2. To find the differences between the means and proportions of normal at two places or in
different periods
3. To find out correlation between two variables X and Y such as height and weight.
(i) Mean: This measure implies arithmetic average or arithmetic mean which is obtained by
summing up all the observations and dividing the total by the number of observations.
(ii) Median: When all the observations of a variable are arranged in either ascending or
descending order, the middle observation is known as median. It implies the mid value of
series. Median is an indicator of central value when one or more of the lowest or the highest
observations are wide apart or not so evenly distributed.
(iii) Mode: This is the most frequently occurring observation in a series, i.e. the most
common or most fashionable. Out of the three measures of central tendency mean is better
and utilized more often because it uses all the observations in the data and is further used in
the tests of significance.
To further simplify the writing of a sum, the Greek letter∑ (sigma) is used as a short hand.
The sum x1 + x2 + x3 +··· xn is denoted,
and read as "the sum of all xi with i ranging from 1 to n". We can now formally define the
mean as follows
Definition: The sample mean of the variable is the sum of observed values x1, x2, x3,...,xn in a
data divided by the number of observations n. The sample mean is denoted by and
expressed operationally
or ∑xi/n
Steps of Calculation:
1. Add together all the values of x and get .
= f1x1+f2x2+----------+fnxn/f1+f2+------fn
= ∑fx/∑f
= ∑fx/N
In case of continuous or grouped frequency list, the value of x is taken as the mid value of the
corresponding class.
Work procedure
Mean ( ) = X1+X2+X3+X4+X5+------Xn/ N]
So = 70+120+110+101+88+83+95+98+107+100/10 = 972/10=97.2
Object 2: The following is the frequency list of the number of telephone calls received at 245
successive one minute intervals in an exchange.
No of class 0 1 2 3 4 5 6 7
Frequency 14 21 25 43 51 40 39 12
Work Procedure
Number of class: 0, 1, 2, 3, 4, 5, 6, 7
N=245
fx =0+21+50+129+204+200+234+84
∑fx= 922
=∑fx/N
So = 922/245
= 3.763
fd = f(X-A) = fX -A.f
=A+
In case of grouped or continuous frequency distribution with class intervals of equal
magnitude, the calculations are further simplified by taking
d=
=A + h
Steps:-
5. Xh
6. Add A + h
The resulting value gives the arithmetic mean of the given distribution
Work Procedure:-
Computation of Arithmetic mean
50-60 55 6 330 2 12
60-70 65 3 195 3 9
N=∑f=50 ∑fx=1670 ∑fd=-8
a) Direct Formula
Mean = ∑fx/∑f=1670/50=33.4 Marks
A=35, h=10
1) ∑( - =0
2) = n1 1+ n2 2/ (n1+ n2)
3) S= ∑f (x-A)2
The sum of squares of the deviations of the given set of observations is minimum
when taken from arithmetic mean
4) =∑fx/N
Object 4: The number 3.2, 5.9, 7.9 and 4.5 have frequency x,x+2, x-3 and x+6 respectively .
If arithmetic mean is 4.876, find the value of x.
∑f=4x+5
∑fx=21.4x+ 14.9
Mean=∑fx/∑f= 4.876
21.4x+ 14.9=4.876(4x+5)
1.896x=9.480
X=9.480/1.896=5
Object 5: The mean salary paid to 1000 employees was found to be Rs. 180.40.After
distribution of salary, it was discovered that the salary of two employees was wrongly entered
as 297 and 165. The correct salary was Rs 197 and Rs 185. Find the correct arithmetic mean.
Work Procedure:
= salary of an employee
= 180400
After incorporating the corrections we have, corrected = 180400- sum of wrong + sum of
correct salaries
=180.32Rs
Let W1,W2, W3….Wn be the weights attached to variable values, x1,x2,….xn respectively. Then
the weighted arithmetic mean usually denote by
= =
In case of frequency distribution, if f1, f2,…..fn are the frequencies of variable values
x1,x2,…..xn respectively then the weighted arithmetic mean is given by
w=
Object 6: Comment on the performance of the students in the universities given below,
using simple and weighted average
M.A 71 3 82 2 81 2
M.Com. 83 4 76 3 76 3.5
B.A.. 73 5 73 6 74 4.5
B.Com. 74 2 76 7 58 2
B.Sc. 65 3 65 3 70 7
M.Sc. 66 3 60 7 73 2
Work Procedure
Computation of simple and weighted Average
University Bombay Calcutta Madras
Course of % of No. of w1x1 % of No. of w2x2 % of No. of w3x3
study pass stud pass stud. pass stud.
(x1) (w1) (x2) (w2) (x3) (w3)
On the basis of simple arithmetic mean which comes out to be same for all the three
universities 72, we cannot distinguish between the pass % of students in the 3 universities.
However, the weighted averages show that the results are best in Bombay (which has highest
weighted average of 72.55), followed by Madras university (72.05) and while Calcutta
university shows the lowest performance
Thus median of a distribution may be defined as the value of the variable which exceeds and
is exceeded by the same number of observation i.e. it is the value such that the number of
observations above it is equal to the number of observation below it. It is the middle most
point or the central value of the variable in a set of observations when observations are
arranged either in ascending or in descending order of their magnitudes.
Calculation of Median
Ungrouped data (Simple series)
Procedure:
1) Arrange the data in either ascending or descending order of magnitude.
2) If the number of observations be odd, the value of the middle-most items is the median.
However, if the number be even, the arithmetic mean of the two middle most items is taken
as median.
When ‗n‘ is even. In this case there are two middle terms th and th .
M=
M= N =∑ f
Continuous series
Procedure
1) Here data is given in the form of a frequency table with class interval.
2) Cumulative frequencies are found out for each value.
3) Median class is then calculated where cumulative frequency lies is called median class.
4) Now median is calculatedby applying the following formula.
M=L+ Xi
N = Total no of frequencies
(a) 21,12,49,37,88,46,55,74,63
(b) 88,72,33,29,70,86,54,91,61,57.
Median is 49.
Median = average of +
M= = = 65.2.
Median is 65.2
Frequency 4 11 19 14 0 2
Work Procedure
= = 25
= 35 fm = 19 C = 15 i = 10
35 + X 10
35 + X 10 = 35 + 5.263 = 40.263
Number of 6 16 7 4 2 8
plants
Height 20 25 50 9 80 40
Procedure
Let us arrange the data (height) in ascending order and then form cumulative frequencies
Here
Object: Calculate the Mean deviation from the median for the following data:
Work Procedure
Md=l +h/f(N/2-c)=40+10/28(50-32)=46.43
Calculation of mode
A. Ungroup data
Procedure:
1) In the case of simple series mode can be determined by locating the value
which occurs the maximum number of times.
2) It can be determined by the inspection only.
3) It is the value of the variable which correspond to the largest frequency.
B. Group data
1. Discrete series
2. Continuous series
Procedure
1) In the grouping table first of all, the values of variables are arranged in ascending
order.
2) In column 1, corresponding frequencies are written
3) In column 2, frequencies are grouped in two‘s beginning with the first value.
4) In column 3, the frequencies are grouped in two‘s beginning with the second value of
the series.
5) In column 4, the frequencies are grouped by three values(i.e,1,2&3)starting with the
first value Write them as shown in the table
6) In column 5, frequencies are grouped into three values beginning with the second
value.
7) In column 6, frequencies are grouped into three values beginning with the third value.
Step 1. First of all, the modern class is ascertained either by inspection method or by
grouping method.
Step 2. After determining the model class, the exact value of mode is calculated by using the
following formula:
Mode (Z) =
Advantages of mode
1) It can be obtained by the inspection.
2) It is not affected by the extreme value.
3) This average can be calculated from open ends classes.
4) It can be easily understood.
5) It can be used to describe qualitative phenomenon.
6) The value of mode can also be found graphically.
Disadvantage of mode
1) Mode has no significance unless a large number of observationsare available.
2) It can‘t be treated algebracally.
3) It is a peculiar measure of central tendency.
4) For the calculation of Mode, the data must be arranged in the form of frequency
distribution.
5) It is not rigidly defined measure.
Object 1: The temperature recorded for the growth of plants in a plant tissue culture
room in Celsius. What is the mode of following data?
20,25,35,25,40,36,29, 30, 22
20 25 35 25 40 36 29 30 22
Variable(X)Temperatures
in °C
Value 20 22 25 29 30 35 36 40
( Temperature )
Number of 1 1 2 1 1 1 1 1
frequency
Because after arranging the above in increasing order 25 Celsius is recorded maximum times
Here 25 repeat 2 times and is most frequent hence 25 is mode.
Object 2- Study of mode in the following series of the number of coloured flowers in a
hybrid flowering plant.
7 – pink, 13 – yellow, 18 – white, 24 – red, 3- maroon
Work procedure: mode is 24 because 24 is the highest occurring number of red flowers in
the plant.
Object 3: The apple trees in an orchard gave different number of apples with following
distribution. Find the mode of distributions
Work procedure
Number of trees (∑f) = 40+30+10+25+20=125
Number of fruits on 125 trees varies from 1 to 5. This is called variable.
Trees bearing 100 flowers are maximum i.e., 40 in number. This represents highest
frequency.
100 is value with highest frequency of 40.
Therefore, Mode= 40 per tree.
Objective 4: Fifty baby carrots were grown using special soil. They were dug and their
lengths were measured (to the nearest mm) with following groups. Calculate mode
(mm)
Frequency 5 2 6 8 9 11 6 3
Work procedure: The model group is the one with the highest frequency, which is 175-179:
a. L = 174.5 (the lower class boundary of the 175-179 group)
b. f(m-1) = 9
c. fm = 11
d. f(m+1) = 6
e. i = 5
Mode (Z) = + ×i
3) A large standard deviation shows that the measurements of frequency distribution are
widely spread out from the mean, while small standard deviation shows that
observations are closely spread in the neighbourhood of mean.
4) Standard deviation indicates whether the variation of differences of any individual
observation from the mean is natural or real due to some specific reasons.
5) It helps in finding the standard error which determines whether the difference between
the means of two similar samples is by chance or real.
Deviation or difference of each observation from the mean is found out using the formula:
dx=X- .This difference between observation and mean is squared
d =
All the squared values are added to calculate the sum of squared deviations i.e, or
2
/n
X= value of variable
= arithematic mean
N= total no of observation
X= (X- )
Steps in calculating standard deviation from grouped data by method involves following
step:
Object 1- Find arithematic mean and standard deviation from data given in the form of
variables 2, 4, 7, 11 and 15
Work Procedure-
x= 2, 4, 7, 11 and 15
Mean ( )= X1+X2+X3+X4+X5+------Xn/ N]
So = 2+4+7+11+15/5 = 7.9
2
(X- (X-
2-7.9= -5.9 34.81
4-7.9= -3.9 15.21
7-7.9= -.9 0.81
11-7.9= 3.1 9.61
15-7.9= 7.1 50.41
∑=110.85
2
σ'= =
Object 2: Calculate mean and standard deviation of each data set of plants variety A, B
and C
Plant (A) 9 10 11 17 13
Plant ( B) 10 10 10 10 10
Plant ( C) 1 1 10 19 19
Work Procedure-
Mean ( ) = X1+X2+X3+X4+X5+------Xn/ N]
10-10 0
11-10 1
7-10 9
13-10 9
∑=20
2
(X- (X-
1-10 81
1-10 81
10-10 0
19-10 81
19-10 81
∑=324
Object 3- Take 20 plants under observation and observed the growth of plants on the basis of
plant height, which is given- as height (X) 10, 13, 17 and 20 cm. Calculate standard
deviation of following.
Mean ( )= X1+X2+X3+X4+X5+------Xn/ N]
Mean ( )=10+13+17+20
Mean ( ) =15
2
(X- (X-
10-15= -5 25
13-15= -2 4
17-15= 2 4
20-15= 5 25
∑=58
Standard deviation (σ') = √1/n∑ (X- )2
Object 4: Calculate the mean and Standard deviation from the following data
Work Procedure
=A + h
=64.5+ (10X27)/75=68.1
=10X1.2505= 12.505
X2 = /E
E= expected frequency
Chi-square (x2) test was first used in testing statistical hypothesis by KARL PAERSON in the
year 1900.
Calculation:
a. Calculate all the expected frequencies i.e, E for all values of i = 1,2,3…….n.
b. Take the difference between each observed frequency ‗O‘ and the corresponding expected
frequency ‗E‘ for each value of i.e ,(O-E).
c. Square the difference for each value i.e., (O-E)2 for all values of i=1,2,3,..n.
d. Divide each square difference by the corresponding expected frequency i.e, calculate (O-E)2\E
for all values of i=1,2,3...n.
e. Add all these quotients obtained in steps ‗4‘ i.e,
Calculations
1) Set up the null hypothesis (Ho): No association exit between the attributes.
2) Calculate the expected frequency ‘E‘ corresponding to each cell by the formula
Eo = Ri X Cj/n
=∑
E = Expected value
O = Observed value
R = Number of rows
C = Number of columns
II. Find from the table the value of chi-suare for the given value of the level of
significance (α) and for degree of freedom (df).
III. If no value for α is mentioned, then the table α = 0.05.V. (i).Compare the computed
value of chi square with with the tables values of
(ii).If the calculated value of <Tabulated value then accept the hypothesis (Ho)
If > Tabulated value then reject the null hypothesis & accept the alternative
hypothesis
OR
Other calculations
I. Set up (a) null hypothesis (Ho): There is no association exist between the attributes.
II. Here contigency table has only 2 rows and 2 columns with four cell frequency viz a,b,c,d
as shown below:
a b R1
c d R2
C1 C2 N
I. The frequency ‗a‘ is placed in the upper left cell and d‘ is placed in the lower right
cell
The frequency ‗b‘ & ―c‘ are placed in other diagonal position.
For simplicity and denote row totals and and denote the number of columns
totals.
Therefore
C. Homogeneity Chi-Square
A test of ―homogeneity‖ must be performed to decide whether the separate samples are
sufficiently uniform to be added together.
Calculations
1) The chi-square of each individual sample should be calculated based on expected ratio.
since these chi- square are to be added, they Yates correction factor should not be used, even
though only 1 degree of freedom may be involved in each calculation.
2) The individual chi-square should be summed to give a total chi-square. In this process total
chi-square accumulated a number of degrees of freedom equal to the sum of the degrees of
freedom in the individual chi- square.
The total chi-square value has two components.
(a) The chi-square contributed by the departure of the pooled data from the expected
ratio.
(b) The chi-square contributed by the difference between individual samples.
To calculate ‗b‘,& ‗a‘ and subtract the value from total chi-square.
Object 1: A genetics engineer was attempting to cross a tiger and a cheetah. She predicted a
phenotypic outcome of the traits she was observing to be in the following ratio 4 stripes only:
3 spots only: 9 both stripes and spots. When the cross was performed and she counted the
individuals she found 50 with stripes only, 41 with spots only and 85 with both. According
to the Chi-square test, did she get the predicted outcome?
Work procedure
Chi-square = (O-E)2 /E
D.F. Value
1 3.841
2 5.991
3 7.815
Since 4.74 is less than 5.991, the null hypothesis put forward by the engineer.
1. Object 2: In the garden pea, yellow cotyledon color is dominant to green, and inflated pod
shape is dominant to the constricted form. Considering both of these traits jointly in self-
fertilized dihybrids, the progeny appeared in the following numbers 193 green, inflated, 184
yellow constricted, 556 yellow, inflated 61 green Do these genes assort independently?
Support your answer using Chi-square analysis.
Work procedure:
Genes assort independently (are NOT on the same chromosome and NOT linked) if they
follow the 9:3:3:1 rule (on the 16 square Punnett square) resulting from a dihybrid cross. In
this dihybrid cross
Observed 556 184 193 61
1/16= x/994 x= 62
= 0.312
df= 3
Since the calculated value is much lower than the p value from the table, so we cannot reject
the null hypothesis. The genes assort independently according to a 9:3:3:1 ratio and are not
on the same chromosome.
Spades 404
Hearts 420
Diamonds 400
Clubs 376
Could it be that the suits are equally likely? Or are these discrepancies too much to be
random?
Work procedure
Expected expected
chi-square-> 2.480
The number of degrees of freedom is 3 (number of categories minus 1). The critical value is
from a table you‘ll have on the exam (using = 0.05).
12.8 SUMMARY
Statistics is a very broad subject, with applications in a vast number of different fields. In
generally one can say that statistics is the methodology for collecting, analyzing, interpreting
and drawing conclusions from information. Putting it in other words, statistics is the
methodology which scientists and mathematicians have developed for interpreting and
drawing conclusions from collected data. Everything that deals even remotely with the
collection, processing, interpretation and presentation of data belongs to the domain of
statistics, and so does the detailed planning of that precedes all these activities.
Statistical analyses need condensation and manipulation of huge amount of data to a
meaningful representative form at the very first sight. Summarisation, condensation and
classification simplify the huge data, improve its main characteristics and to a comparison of
data obtained from different sources. In some cases, data is condensed to a single value,
especially in cases where a direct comparison is to be made between data obtained from
different sources. Such a single value expression or presentation of data is called central
value. It is used to represent a whole series. It neither includes the lowest value of the series
nor the highest value, but a value somewhere between these two limits and possibly in the
centre, where most of the values of the series cluster. This central value of the series is also
called the central tendency or average. The measures devised to calculate the central tendency
are known as measures of central tendency. It may be easily subjected to further
mathematical calculations by using mean, median mode standard deviation and chi square
test‘. An average value could be preferred to others if it is capable to be used for further
statistical computation.
12.9 GLOSSARY
Analysis bias (for data)-Gearing data analysis to support a particular hypothesis and
ignoring aspects that contradict the hypothesis, e.g., using an inflated P-value for some
statistical tests, using proportions when mean is appropriate, etc.
Analysis of variance- Breaking variance into its components such as within groups and
between groups. This method is used in regression analysis and in various other situations but
more commonly for comparing three or more means.
Analysis -The process of going into the deep of a phenomenon, data-set, thought, etc., and
looking at its various components.
Arithmetic mean -Same as mean.
Binary variable: A variable whose only two possible values, usually zero and one.
Biostatistics -The science dealing with medical uncertainties in one or more groups of
subjects-their identification, measurement, and control—leading to decision with least error.
Chi-square test-A versatile statistical procedure that is used to test different types of
hypothesis on proportions, such as equality, trend and relationship.
Data- A set of observations, generally in numerical format but can be in text format also
(plural of datum).
Degree of freedom: The number of values in the final calculation of a statistic that are free to
vary
Frequency distribution: It is a table that displays the frequency of various outcomes in
a sample. Each entry in the table contains the frequency or count of the occurrences of values
within a particular group or interval, and in this way, the table summarizes the distribution of
values in the sample.
Frequency- Used in two senses: 1. Frequency of occurrence per unit of time (per month, per
year, etc.). 2. Number of subjects with a particular characteristic or with values in a particular
interval, such as how many have fruits in apple trees.
Goodness of fit - How well the actual observations fit into a specified pattern. The goodness
of fit is statistically tested mostly by chi-square method.
Mean: Arithmetic average, i.e., the sum of all the values divided by the number of
observations. The mean of a binary variable is equal to the proportion of ones because the
sum of all the zero and one values equals the number of ones. The mean can be heavily
influenced by outliers.
Median-The most middle value obtained after arranging values in increasing or decreasing
order. Median seeks to divide the group in two equal halves, each with n/2 individuals.
Sometimes in practice exactly equal halves are not possible, and they are divided into nearly
equal halves.
Mode- The most commonly occurring value, i.e., a value seen in highest number of subjects
Null hypothesis: Customarily but not necessarily a hypothesis of no effect, e.g., no reduction
in means blood pressure or no correlation between age and blood pressure. The null
hypothesis, labeled H0, is often used in the frequents branch of statistical inference as a
―straw person‖; classical statistics often assumes what one hopes doesn‘t happen (no effect of
a treatment) and attempts to gather evidence against that assumption (i.e., tries to reject H0).
H0 usually specifies a single point such as 0mmHg reduction in blood pressure, but it can
specify an interval, e.g., H0: blood pressure reduction is between -1 and +1 mmHg. ―Null
hypotheses‖ can also be e.g. H0: correlation between X and Y is 0.5.
Observational study: Study in which no experimental condition (e.g., treatment) is
manipulated by the investigator, i.e., randomization is not used.
Quantitative data-Collection of observations on characteristics that could be numerically
expressed for an individual such as number of fruites, plant species, and weight of seeds.
Most common summary measures for quantitative data are mean and standard deviation
(SD).
Sample -A part of the target population, which is actually studied. Sample size — The
number of subjects or units in a sample.
Sampling-Choosing a part from the whole, such as choosing 300 child births out of 5000 in a
hospital in one year for studying the intrauterine growth retardation. See random sampling,
purposive sampling.
SD -Short for standard deviation
Standard deviation (SD)-Most common and generally most appropriate measure of
dispersion obtained as positive square root of variance.
Standard error: The standard deviation of a statistical estimator. For example, the standard
deviation of a mean is called the standard error of the mean, and it equals the standard
deviation of individual measurements divided by the square root of the sample size. Standard
errors describe the precision of a statistical summary, not the variability across subjects.
Statistic - A summary measure for any characteristic in the sample or the group actually
studied, such as mean, median or standard deviation of a sample, or proportion of subjects
found affected in a sample.
Statistical analysis-Subjecting data to the rigours of statistical methods so that the
uncertainty levels are either quantified or minimized, or both.
Variable - A characteristic that varies from person to person, or from situation to situation.
Platelet count in different persons is variable but number of eyes or number of fingers is not a
variable. See quantitative variable, qualitative variable, discrete variable, continuous variable,
dependent variable, and independent variable.
Variance -A measure of dispersion or scatteredness of quantitative data obtained as average
of the squared deviations from mean
12.10 REFERENCES
Greenwood, P.E.; Nikulin, M.S. (1996). A guide to chi-squared testing. New York:
Wiley. ISBN 0-471-55779-X.
Aliaga, Gunderso. Interactive Statistics. Pearson/Prentice Hall
Blackwell Basic Statistics: Instructors Commentary isted McGraw-Hill
Example 6: Find the mean of the following set (. 8, 11, 6, 22, 3) of integers
Example 7: The mean score of a group of 20 students is 65. Two other students whose scores
are 89 and 85 were added to the group. What is the new mean of the group of students?
Example 10: Find the median of the following set of points in a game:
15, 14, 10, 8, 12, 8, 16
Example 11: Find the mean, median and mode of the following set of data:
23, 29, 20, 32, 23, 21, 33, 25
Example 14: Find the standard deviation for the following data series: 12,6,7,3
15,10,18,5
Example 15: Find the standard deviation for the following series of
numbers:
2, 3, 6, 8, 11
12, 6, 7, 3, 15, 10, 18, 5
Example 17: Given the statistical distribution of the table Calculate the
standard deviation.
xi 61 64 67 70 73
fi 5 18 42 27 8
Example 19: Find the mode for each of the following frequency tables: The frequency table
below shows the weights of different bags of rice.
Weight (kg) 45 50 55 60 65 70 75 80
Bags of rice (Frequency) 8 11 7 10 9 10 12 8